Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2423 120 4e-22 seq3629 111 2e-19 >seq2423 Length=50609 Score = 120 bits (132), Expect = 4e-22 Identities = 321/483 (66%), Gaps = 11/483 (2%) Strand=Plus/Minus Query 114788 TCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAG 114847 || || ||||| ||||| || || || |||||||| ||||| | || | ||| || Sbjct 20205 TCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAAATCTCGTGCT 20146 Query 114848 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 114907 ||| ||||| || ||||| ||| | |||| ||| || | ||||||||| ||| Sbjct 20145 CGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCATGC 20086 Query 114908 CACGGTTCCAGGTACACCGCGATTGACCCCTTACGA---CGACCAGCCTGGTTTACATAC 114964 || || || || || | || | ||||| || || | |||| | || | || || Sbjct 20085 CAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGTAT 20026 Query 114965 CTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTC 115024 | |||||| |||| || || ||||||||||||| || |||| || ||||| ||| Sbjct 20025 CGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTC 19966 Query 115025 CCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGC--ATACCAATACCCCCTG 115082 || |||||| | || ||| | || || |||| | | | |||||||| || | Sbjct 19965 CCGCGAATATAACTGTTGGTGGAGC-GA-ATATTGGAAATACTGACGCCAATACCGCCAG 19908 Query 115083 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCAC 115142 |||||||||| || ||| || | | || || |||| || |||||||| || ||| Sbjct 19907 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCA- 19849 Query 115143 CCTTATTTGCGATA--AGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAA 115200 ||| || |||| || || || ||| | ||| || | || || || || ||||| Sbjct 19848 TCTTGCATG-GATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAA 19790 Query 115201 GAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGAC 115260 || || || || || || | || | ||| ||||| | || || || ||||| || Sbjct 19789 AAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAAC 19730 Query 115261 GGC 115263 ||| Sbjct 19729 GGC 19727 >seq3629 Length=149247 Score = 111 bits (122), Expect = 2e-19 Identities = 188/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || || || || ||||| |||||| ||||| || ||||| ||||| ||||| | || Sbjct 30953 TGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCT 31012 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 || ||||||| ||| || || | || ||||| || ||||| |||||||| || || | Sbjct 31013 CGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCC 31072 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCC 126238 || || || | | | || ||||| ||| |||||| || |||| |||| |||| Sbjct 31073 GCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCACCATTTCAACGCC 31132 Query 126239 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG-AGTTCCTTCTT 126297 || || || || || | ||||||| || | ||||| || || | | || || Sbjct 31133 CATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG-CATAGTAAATGCTGTTT 31191 Query 126298 TTCTGATGGATCTTTGATGTACTTATCTAT 126327 ||| | ||||||||||||||| |||| || Sbjct 31192 TTCGGTTGGATCTTTGATGTATGTATCAAT 31221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597325636384600