Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq655 113 3e-20 seq25 104 2e-17 >seq655 Length=45005 Score = 113 bits (124), Expect = 3e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 14987 CTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15046 ||||||| ||||||||||| ||| ||| |||| || |||||||| || ||| | | Sbjct 27415 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAA 27474 Query 15047 TCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTT 15106 ||||||||||||||||| ||||||||||||||||| ||| || || ||| | | Sbjct 27475 TCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTAT 27534 Query 15107 CTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15166 | || || ||| ||| || || | || || ||||| || || || ||||| || | Sbjct 27535 CGATGGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTTTTGACGA 27594 Query 15167 AAATTTGCAT 15176 |||| ||||| Sbjct 27595 AAATCTGCAT 27604 >seq25 Length=104834 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15039 || || ||||| || ||||||||||| ||| | | ||||||||| |||||| ||| Sbjct 78453 GTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTACGTCCGTCTTCTAGTTGTTTTCCA 78512 Query 15040 GCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTT 15099 ||| | |||| ||| || || || ||||||||||| ||||| ||| ||| ||| Sbjct 78513 GCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCCTTT 78572 Query 15100 ACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTT 15159 ||| | || || || || | || || || || || ||||| || || || || ||| Sbjct 78573 ACATTATCGATCGTGTCTGAAGACTCAACTTCCAAAGTGATGGTCTTTCCAGTAAGCGTT 78632 Query 15160 TTTACAAAAATTTGCAT 15176 || |||||||| ||||| Sbjct 78633 TTCACAAAAATCTGCAT 78649 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15039 || || ||||| || ||||||||||| || ||| ||||||| | |||||| || Sbjct 78225 GTTGATTCTTTCTGGATGTTGTAATCCGCAAGCGTTCGTCCGTCTTCCAGTTGTTTACCG 78284 Query 15040 GCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTT 15099 || | || | ||| || ||||| ||||||||||| ||||| || || || Sbjct 78285 GCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGGATCTTCGCCTTC 78344 Query 15100 ACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTT 15159 ||| | || |||||||| | ||| || || || ||||| ||||| || ||||| || Sbjct 78345 ACATTGTCGATAGTATCTGAAGATTCCACTTCCAACGTAATAGTTTTCCCAGTCAGCGTC 78404 Query 15160 TTTACAAAAATTTGCAT 15176 || |||||||||||||| Sbjct 78405 TTAACAAAAATTTGCAT 78421 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| ||||| ||||| || ||||||||||| || ||| ||||||| | ||| Sbjct 77990 ATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCCGTCTTCCAGTTG 78049 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||| || || | || | ||| || ||||| ||||||||||| ||||| || || Sbjct 78050 TTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGGATCTT 78109 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || ||| | || ||||| || || || || | || || ||||| || || Sbjct 78110 CGCCTTCACATTGTCAATAGTGTCAGATGACTCGACTTCCAGAGTTATAGTTTTCCCGGT 78169 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 ||| || || |||||||||||||| Sbjct 78170 CAGCGTCTTAACAAAAATTTGCAT 78193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357375687847325