Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2423 116 3e-21 seq655 114 1e-20 seq25 100 3e-16 >seq2423 Length=50609 Score = 116 bits (128), Expect = 3e-21 Identities = 603/938 (64%), Gaps = 27/938 (3%) Strand=Plus/Plus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAG-AG 123664 || |||||||||||||| ||||| ||||||||||| || || | ||| |||||||| || Sbjct 20369 GAGACCGGAACGCCGTATATGCTTTACAAAGACGCTTGTAATCGTAAATCCAATCAGCAG 20428 Query 123665 CAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGC 123724 | ||| ||||| || || || ||||| |||| ||||| ||||| ||| || | Sbjct 20429 AATCTT-GGAACCATTCGATCAAGCAATCTCTGCTGTGAAATCATCGAGTACTCAGACTC 20487 Query 123725 CGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGC---GTGAATCGTTGCGTCGAAAA 123781 | | ||||||| || || ||||||||||| | | || || || ||| || | | Sbjct 20488 CAAAGAAGTGGCAGTATGCAATTTGGCTTCCA-TCGCATTGTCAAAATTTGTGTATCAGA 20546 Query 123782 CGGCGCTTTTAATTTCCAAACGCTCAAACG-CATAACAAAAACTGTAGTAAAGAATTTGA 123840 | ||| | ||| |||| | | ||| || ||||||| || || ||| | | Sbjct 20547 AAG-AATTTCAGTTTGCAAA--ATTATACGAAATCACAAAAATCGTTACGAAAAATCTCA 20603 Query 123841 ACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAAC 123900 ||||||| || ||| | |||| |||||| | ||||| | || ||| | || Sbjct 20604 ACAAAATCATTGATCTCAATTATTATCCGATTCCTGAAGCACAAGTGAGCAATCAGCGAC 20663 Query 123901 ACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGC 123960 | ||||| | ||| | ||| ||||||| | ||||| ||||| || || || | | | Sbjct 20664 ATCGACCGATTGGAATCGGCGTTCAAGGTCTTGCCGATACGTTTTTACTGATGAGTCTTC 20723 Query 123961 CGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACG 124020 | | |||||| | | || ||| || | |||| ||||| || |||| || Sbjct 20724 CATTTGAAAGCAAAGCTGCTCGCGAGCTCAACAAAGAAATTTTTGAAACGATGTATTTCG 20783 Query 124021 GCGCTTTGGAGGCGAGCTGCGAACTTG--CGAAAATTCACGGCGCGTACGAAAGTTACGC 124078 || |||| || | ||| | | || || | ||| ||||||| || || || Sbjct 20784 CGGCGATGGAAGCTTCCATGGAATTGGCACGGGAA--CTCGGACCGTACGAGAGCTATGC 20841 Query 124079 GGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATG-CTACACCGA--C 124135 || || | || |||||||| || || | || |||||| | | | |||| | Sbjct 20842 TGGATCACCAGTTAGTCGAGGTATCTTTCAATTTGATATGTGGCAGGTCATTCCCGATTC 20901 Query 124136 AAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTC 124195 | ||||| |||| || ||| | | || | || ||||| | || ||||| Sbjct 20902 CGGTCGATGGGATTGGAAGCAGTTGAAAGAGCAAGTAGCTACTCACGGAATCCGAAACTC 20961 Query 124196 GCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATC 124255 || || | || ||||| || || | || ||||||||| | || || ||| || Sbjct 20962 TTTGCTGCTCGCTCCGATGCCAACCGCCTCAACGGCTCAAATTCTCGGCAATTGCGAGTC 21021 Query 124256 CTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCG-ATTTTCAAG 124314 |||||||||||||| ||| ||| | ||||| || | || || | |||| ||| Sbjct 21022 TATCGAGCCGTTCACTTCCAACATGTTCAATCGACGCGTCCTCGCTGGAGAATTTACAAT 21081 Query 124315 TGATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGT--ACGATGAAAACAT 124372 || | || | || | |||| || | | | | | ||||||| || || | || | Sbjct 21082 TG-TCAACAAATATCTCATGGAAGAGCTTATTGAGATGAATTTGTGGAC-AT-CAGACGT 21138 Query 124373 GCGCAACGAAATTATT-GCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAAC 124431 || || |||| || ||| | | || ||| || |||||| ||||| | Sbjct 21139 TCGGAATCAAATCCTTCGCGATC-GCGGTTCCGTACAAAATATCGCTGAAATTCCTTCTC 21197 Query 124432 ACGTCAAGCAACTGTACAAAACCGTGTGGGAAATGAA-AAATAAACGATTAATTGAAATG 124490 | || || || ||||||||| || |||||||| || || | ||||| | || ||| Sbjct 21198 ATGTGAAAGAAAAGTACAAAACAGTTTGGGAAATCAAGCAAAAGGCGATT-TTGGACATG 21256 Query 124491 GCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATC 124528 || | ||| ||||| ||||||| ||| |||||||| Sbjct 21257 GCTGCCGATCGAGGAGCGTACATTTGTCAGAGTCAATC 21294 >seq655 Length=45005 Score = 114 bits (126), Expect = 1e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 45153 TTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATC 45212 |||||||| || ||||| || ||| || |||||||||||||||||| | ||| Sbjct 27417 TTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAATC 27476 Query 45213 AATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCT 45272 || || || ||||| || ||||| ||||| || |||||||| || || | || Sbjct 27477 AAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTATCG 27536 Query 45273 ACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAA 45332 | ||||||||| || ||||| || ||||| | ||||| ||||| || ||||| || ||| Sbjct 27537 ATGGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTTTTGACGAAA 27596 Query 45333 ATTTGCAT 45340 || ||||| Sbjct 27597 ATCTGCAT 27604 >seq25 Length=104834 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| ||||| ||||| || || || || || || ||||| | ||| || || Sbjct 77984 CACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCCGTCTTC 78043 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 || |||||| || || | || | ||||||||||| || ||||| |||||||| || || Sbjct 78044 CAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTG 78103 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || || | || | ||||| || ||||||||||| ||||| | ||||| Sbjct 78104 GATCTTCGCCTTCACATTGTCAATAGTGTCAGATGACTCGACTTCCAGAGTTATAGTTTT 78163 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || || |||||||||||||| Sbjct 78164 CCCGGTCAGCGTCTTAACAAAAATTTGCAT 78193 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | | ||| | |||| ||||||||| || ||||| || ||||| Sbjct 78192 ATTCCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCC 78251 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || |||| |||||| || || | || | ||||||||||| || Sbjct 78252 GCAAGCGTTCGTCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGA 78311 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||| || || || || || | || | || || ||||| || Sbjct 78312 GGAATTCCTTCTTTGTCCTGGATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCC 78371 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | |||| ||||| || || || || || |||||||||||||| Sbjct 78372 ACTTCCAACGTAATAGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCAT 78421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451982040600200