Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2423 156 5e-33 >seq2423 Length=50609 Score = 156 bits (172), Expect = 5e-33 Identities = 634/984 (64%), Gaps = 45/984 (5%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 |||||| | ||| | ||||| || || |||| || || || || | ||| | || Sbjct 19672 CCCACAACATATGATAATGCGAGTGGCTGTCGGCATACACAAAGAGAATTTGGATGCCGT 19731 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 |||||| || || || | ||||| | | || | || ||||| || || || || Sbjct 19732 TTTGGAAACGTATGAACACATGTCACAAAAGTTCTTTACGCATGCAACTCCGACGCTTTT 19791 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTAT-TGCAAACAAGGAGG 111789 ||| || || || || |||||||| | || ||||| || | | || |||| | | Sbjct 19792 CAATGCGGGAACGCCTCGACCCCAATTATCGTCGTGTTTTCTATTATCCATGCAAG-ATG 19850 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 |||| ||| | |||||||||| ||| || | ||||||| || ||||||||||||| Sbjct 19851 ATTCTATCGACGGCATTTACGACACGCTGAAACAATGTGCGTGTATTTCAAAGTGGGCTG 19910 Query 111850 GTGGTATCGGGAT--GCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTAC 111907 | ||||| || | | | |||| || | | ||| ||| | |||| | || || Sbjct 19911 GCGGTATTGGCGTCAGTATTTCCA--ATATTCGCTCCACCAACAGTTATATTCGCGGGAC 19968 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 ||||| || |||| ||| ||||||||||||| || || || | |||||| || || Sbjct 19969 GAATGGAAGTTCGAATGGAATTGTTCCAATGCTTCGGGTGTTCAATGACACAGCTCGATA 20028 Query 111968 TGTAAACCAA---GCTGGGCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 || | ||| | |||| || || || ||| | ||| | ||||| ||||| ||||| Sbjct 20029 CGTTGATCAAGGTGGTGGGAAGCGGAAAGGGTCTTTTGCAATTTATCTAGAGCCCTGGCA 20088 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||||||||| | ||||| || || | ||| || || || |||| || Sbjct 20089 TGCGGATATCTTTGAGTTTCTGGAACTACGTAAGAATCATGGAAATGAACTCCATCGAGC 20148 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 || ||| | || | ||||| ||||| || ||||| || ||||| | || || || | Sbjct 20149 ACGAGATTTATTTTATGCTCTTTGGATCCCCGATCTGTTTATGAAACGTGTGGAAGACAA 20208 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 | ||| | | || ||||| || |||| || | || | || | | |||| | Sbjct 20209 CCAAGAATGGAGTTTATTCTGTCCGAACGAGGCTCCACGACTTTATGA-GACATGGGGAA 20267 Query 112205 G-GAGTTTGAAGCCCTCTACACAAAGTACGAG---GAAGAAAGT---CGGGCGACTGCGA 112257 | || ||||| || | || |||||||||| || | | | || ||||| | Sbjct 20268 GCGAATTTGATGCGTTATATGAAAAGTACGAGTCTCAAAACATTGCCCGAAAGACTGTCA 20327 Query 112258 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 | ||||| | ||||| || ||| | | ||| | ||||| || || | Sbjct 20328 AAG-CCCAGC-----AATTGTGGTTTGCCATTTTGGATAGTCAGATTGAGACCGGAACGC 20381 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAAT-TTGG----G 112372 | |||||||||||||||||||| ||||| | || ||||| ||||| |||| Sbjct 20382 CGTATATGCTTTACAAAGACGCTTGTAATCGTAAATCCAATCAGCAGAATCTTGGAACCA 20441 Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGA---CAAAGATGA 112429 | ||||||| ||| ||||| |||||| | || | |||| |||||| | Sbjct 20442 TTCGATCAAG-----CAATCTCTGCTGTGAAATCATCGAGTACTCAGACTCCAAAGAAG- 20495 Query 112430 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA 112489 ||| || || || | || || ||||| | | || | |||| ||| | ||| Sbjct 20496 --TGGCAGTATGCAATTTGGCTTCCATCGCATTGTCAAAATTTGTGTATC-----AGAAA 20548 Query 112490 GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAG 112549 || |||| | | || |||| | ||||| | || |||| || || ||||| || |||| Sbjct 20549 GA-ATTTCAGTTTGCAAAATTATACGAAATCACAAAAATCGTTACGAAAAATCTCAACAA 20607 Query 112550 AGTTATTGATAGAAATTTTTACCC 112573 | | |||||| |||| ||| || Sbjct 20608 AATCATTGATCTCAATTATTATCC 20631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620713341496400