Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2423 123 3e-23 seq3629 91.5 2e-13 >seq2423 Length=50609 Score = 123 bits (136), Expect = 3e-23 Identities = 241/352 (68%), Gaps = 13/352 (4%) Strand=Plus/Minus Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751 ||||| |||| ||| || | |||||||| ||||| || || ||||| | || | || Sbjct 20118 CGTAGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGAC 20059 Query 110752 CCCTTACGA---CGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808 || || || | ||| | || | ||| || || |||||| ||||||| |||| ||| Sbjct 20058 CCTTTCCGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGC 19999 Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATT---CTGGACTTATTGGCA 110865 || |||| |||||||| || ||||| || || | ||| ||| || ||| Sbjct 19998 ATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTG---TTGGTGGAG 19942 Query 110866 CGAATGTCGTGGATATGCATAC--CAATACCACCCGCCCACTTACTAATTTGTGCACACT 110923 ||||| | |||| || | || ||||||| || |||||||| ||| ||||| | Sbjct 19941 CGAATAT--TGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATT 19884 Query 110924 CTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983 | | || || | ||||| || || || ||||| | | ||| | |||||| || | Sbjct 19883 GTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAAAACACG 19824 Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035 | || | || || |||||||||||||||||||| || || || || ||||| Sbjct 19823 ACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATG 19772 >seq3629 Length=149247 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| || ||| || |||||||| ||| |||||||||||| |||||||||||| Sbjct 30941 GCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCA 31000 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 ||||| | ||||| |||||| |||||||| || | || || ||| || || ||||| Sbjct 31001 GGCATCAATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATT 31060 Query 119616 CCCTCCAC 119623 || || || Sbjct 31061 CCTTCGAC 31068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588948428561000