Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2423 165 1e-35 >seq2423 Length=50609 Score = 165 bits (182), Expect = 1e-35 Identities = 682/1057 (65%), Gaps = 44/1057 (4%) Strand=Plus/Minus Query 106279 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAG--ACTTTCGC 106336 ||| || ||||||||||| || | ||||| |||| |||||| ||| |||| || Sbjct 20701 ATCGGCAAGACCTTGAACGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGC 20642 Query 106337 G-CAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 106395 ||| || |||||| |||| ||||||| | ||| |||||||| ||||| || Sbjct 20641 TTCAGG---AATCGGATAATAATTGAGATCAATGATTTTGTTGAGATTTTTCGTAACGAT 20585 Query 106396 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT 106455 ||||||||||| | | |||| || | | ||| | | | ||| || ||| | || Sbjct 20584 TTTTGTGATTTCGTATAATTTTGCAAACTGAAA--TTC---TTTCTG-ATACACAAATTT 20531 Query 106456 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 106515 || | ||||| || ||||||||||| || ||| || | |||| |||||| | Sbjct 20530 TGACAATGCGATGGAAGCCAAATTGCATACTGCCACTTCTTTGGAGTCTGAGTACTCGAT 20471 Query 106516 AATTTCTGTACACAAGTTG---GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTT 106572 ||||| || | ||| || | ||| || || | ||||| || || || Sbjct 20470 GATTTCACAGCAGAGATTGCTTGATCG---AATGGTTCCAAGATTCTGCTGATTGGATTT 20414 Query 106573 TTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAG 106632 || || || || ||||| ||||| || ||||| || ||||| |||| | | Sbjct 20413 ACGATTACAAGCGTCTTTGTAAAGCATATACGGCGTTCCGGTCTCAATCTGACTATCCAA 20354 Query 106633 AATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTT--GGCCCGTCCCTCCGCCTCG 106690 ||| || ||||| | |||| ||| | | || ||| | | |||| Sbjct 20353 AATGGCAAACCACAATTGCTGGGCTTTGACAGT--CTTTCGGGCAATGTTTTGAGACTCG 20296 Query 106691 TACTTTGTGTAGAGGGCTTCAAACTC-CTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 106749 |||||| || | || ||||| || || |||| | || | || | ||| |||| Sbjct 20295 TACTTTTCATATAACGCATCAAATTCGCTTCCCCATGTC-TCATAAAGTCGTGGAGCCTC 20237 Query 106750 GTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGG 106809 || |||||||| | | ||||| || || || || ||||| || || || || Sbjct 20236 GTTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGG 20177 Query 106810 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 106869 ||||| || | |||| | ||||| ||| ||| | || || || || Sbjct 20176 GATCCAAAGAGCATAAAATAAATCTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACG 20117 Query 106870 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC 106929 || || || ||||| | ||||||||| ||||| ||||| ||||| | ||| | ||| || Sbjct 20116 TAGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGA-CC 20058 Query 106930 CTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 106983 ||||| ||| ||| |||||| || || || |||||| | || || || ||||| Sbjct 20057 CTTTC--CGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGAAG 20000 Query 106984 CATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCT 107043 |||||||| ||| |||| || ||||| ||||| |||||| | || ||| | Sbjct 19999 CATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGTTGGTGGAGCG 19940 Query 107044 CACATCATGGATGTGC--ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 107101 | || |||| | | | |||||||| |||||||||||||| || |||||| | Sbjct 19939 AATAT--TGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATTGT 19882 Query 107102 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 107161 | || || | || || |||| ||| || || || | ||| | || || || Sbjct 19881 TTCAGCGTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAAAACACGAC 19822 Query 107162 GACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG---AATGAAC 107218 || | || |||| || || || |||||||| || || || ||||| || || |||| Sbjct 19821 GATAATTGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCGTAAAGAAC 19762 Query 107219 ATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATG 107278 | ||| ||||| | || || || ||||| || | ||| | | || ||| ||| Sbjct 19761 TT---TTGTGACATGTGTTCATACGTTTCCAAAACGGCATCCAAATTCTCTTTGTGTATG 19705 Query 107279 CCGATGGCCACACGCATAAACATGTATTG-GGGTGTT 107314 |||| ||||| ||||| | ||| | ||| ||| ||| Sbjct 19704 CCGACAGCCACTCGCATTATCATATGTTGTGGGCGTT 19668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589953181523800