Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3405 136 5e-27 >seq3405 Length=99690 Score = 136 bits (150), Expect = 5e-27 Identities = 276/399 (69%), Gaps = 8/399 (2%) Strand=Plus/Minus Query 154713 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCA 154772 |||||||| ||||| ||| ||| || |||||||| ||||| |||||||| || ||||| Sbjct 56581 AATGTATGCTTGATTCCAATGTCTGCTCATGGAACGAATCCAGCTAGTGCGGTAATGGCT 56522 Query 154773 GGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGA-CATCAAAGATCT 154831 || ||||||||||| | ||| ||| || || | || || || || | || | ||| | Sbjct 56521 GGTATGAAAGTTGTGGTCGTCCAGTCAGACGACAAGGGGAATATCGATCGTC-AGGATTT 56463 Query 154832 AGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATC 154891 ||| || ||||| | | | | || |||| || | | ||||| || |||||||| Sbjct 56462 AGAAAACAAAGCGAAAAAGCACGCAAATGAATTGAGTGCTCTCATGATCACCTACCCATC 56403 Query 154892 TACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAG-ATCG-TTCATGACAAT 154949 || ||||||| || | | | | | | | |||||| | | || | | || || Sbjct 56402 CACGTATGGTGTCTTCG-AGCAAGGAGTCCA-AGATATCTGCGCATTGATCCACTCGTAT 56345 Query 154950 GGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACT-AGCAAAACC 155008 ||||| || || || | |||||||| ||| | |||||||| || || || |||| | Sbjct 56344 GGTGGCCAAGTGTACATGGATGGAGCGAATATGAATGCACAAGTCGGCCTGTGCAATCCG 56285 Query 155009 ATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACA 155068 | | | ||| || ||||| || ||||| || | || ||||||||||| || || || Sbjct 56284 AAATCCAT-TGGAGCTGATGTCTGCCATCTCAATCTCCACAAAACATTCTGCATCCCTCA 56226 Query 155069 TGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGC 155107 || ||||| ||||| || || || | || || ||||| Sbjct 56225 CGGTGGTGGTGGTCCAGGAGTTGGAACCATTGGCGTAGC 56187 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAG 153266 || || ||||| || ||| ||| |||||| | || || || || ||| | || ||| Sbjct 58144 ATCGGCCAAGGGTATCATGACTGCATCACACCCGCGGTTATCCAACGTAACATGCTGGAG 58085 Query 153267 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 153326 ||||| | ||||| ||| | || || || || ||||||||||| || || || ||||| Sbjct 58084 AATCCGGGCTGGTATACAGCGTATACGCCGTACCAAGCTGAGATCTCACAAGGTCGATTG 58025 Query 153327 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAAC 153386 ||| | | |||| || || | | ||| || |||||||| | | | || Sbjct 58024 GAAATGCTGCTGAATTTTCAGACAGTGGTTCAAGATCTCACAGGATTGGAATTCTCGAAT 57965 Query 153387 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 || || || ||||||||||| || || ||||| ||||||||| Sbjct 57964 GCGTCACTTTTAGATGAAGCGACAGCTGCAGCTGAAGCAATG 57923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579185685600800