Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq25 105 4e-18 >seq25 Length=104834 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||| || |||| ||| ||||| | || ||||| ||||| |||||||| Sbjct 78003 TCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCCGTCTTCCAGTTGTTTACCGGCAAAA 78062 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 ||||| |||||||||||| | || | || || ||||| |||||| || || Sbjct 78063 ATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGGATCTTCGCCTTCACATTG 78122 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || || | ||||| ||||| || || || ||||| ||| Sbjct 78123 TCAATAGTGTCAGATGACTCGACTTCCAGAGTTATAGTTTTCCCGGTCAGCGTCTTAACA 78182 Query 34971 AAGATCTGCAT 34981 || || ||||| Sbjct 78183 AAAATTTGCAT 78193 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || ||||||||| ||||| || |||| ||| ||||| | || ||| Sbjct 78213 ACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCAAGCGTTCGTCCGTCTTCC 78272 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||| |||||||| ||||| |||||||||||| | || | || || ||||| Sbjct 78273 AGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGG 78332 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| || || || | ||||| || | || || || | || || || Sbjct 78333 ATCTTCGCCTTCAC--AT--TGTCGATAGTATCTGAAGATTCCACTTCCAACGTAATAGT 78388 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || || || ||||| ||||| || ||||| Sbjct 78389 TTTCCCAGTCAGCGTCTTAACAAAAATTTGCAT 78421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324618783012360