Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq3629 264 1e-65 >seq3629 Length=149247 Score = 264 bits (292), Expect = 1e-65 Identities = 593/878 (68%), Gaps = 16/878 (2%) Strand=Plus/Plus Query 36890 ATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCAT 36949 |||||||||||| ||| | || ||||| ||||| ||||||| || || || | ||||| Sbjct 30652 ATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCAT 30711 Query 36950 AAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAGA-AGCC 37008 | ||||| |||||||| | | ||||| | || | | || | | | | | | Sbjct 30712 CCAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTG-ACGCCAAGTGCATGTAACAATC 30770 Query 37009 TATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTA 37068 |||||| ||||| || ||||||| || ||| | | || || |||||||| | | Sbjct 30771 GATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGA 30830 Query 37069 CTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128 |||||| || |||| | | |||| || ||| || || || || || || || | Sbjct 30831 CTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCAT 30890 Query 37129 CAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAA--ACAATAAACATGCAAAATC 37186 |||| |||| | | | ||||| | || | ||| | ||||||||| || Sbjct 30891 GAATAGAGCCTTCTG--GAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAAGTC 30948 Query 37187 ACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAA 37246 |||||||| |||||||| | ||| || | ||||| |||||| | ||| ||||| || Sbjct 30949 ACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAA 31008 Query 37247 ACCTCtttttttAATCCAAAATATTGCTGCAAAA-GATCCAGAAAAGAAAATACCTTCAA 37305 |||| ||| || | ||||||||| | ||| || ||||| || || || || ||||| | Sbjct 31009 TCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGATTCCTTCGA 31067 Query 37306 CTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA--CTATA-ATCAGAAATCCAtt 37362 | || ||||| ||||| | | | | || | | | || | ||| | ||||| Sbjct 31068 CGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCA---CCATT 31124 Query 37363 tttttGTCCAATCTGCCTTTAATT-TAACACATTCAATTGTTTCAATTGCTTTTAAGAGA 37421 | | ||| | ||| |||| | |||| || ||||||||||| || || | | Sbjct 31125 TCAACGCCCATTGTGC-TTTATTGGTAACGCACGGGATTGTTTCAATCGCGCATAGTAAA 31183 Query 37422 AAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAG 37481 | |||||| |||| | || || |||||||| | ||| ||||| ||| ||| Sbjct 31184 TGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAG 31243 Query 37482 TGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACA 37541 || |||||||| || || || || || |||||||| || | |||||| | | |||||| Sbjct 31244 TGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGATTTGAACC 31303 Query 37542 TCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAA 37601 || | || || | || | ||||||||||| ||||||||||| ||||||||||| Sbjct 31304 TCACTGCTGAAATTCATGGCGAGATTTTCATTAACAATCCCATCACTGGCTGCAAAGAAG 31363 Query 37602 GCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATA 37661 || | || | ||| ||||| ||||| |||| | |||| || ||| ||||| || Sbjct 31364 GCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATATTAAGCCAGTCATTCATG 31423 Query 37662 TCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATC 37721 || | ||||| | ||| || |||||||||| |||||| ||| |||||||| Sbjct 31424 TCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACATG 31483 Query 37722 GTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759 |||||| ||| |||||||| ||||||| ||||| Sbjct 31484 TCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAA 31521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592289072169800