Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq25 91.5 1e-13 seq655 82.4 6e-11 >seq25 Length=104834 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| ||| ||||| |||||| ||||| |||||||| | || |||| Sbjct 77976 AGACGAAGCACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGT 78035 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| || ||||||||||| || || || || || || | |||| || || Sbjct 78036 CCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCT 78095 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | || || || | ||| || |||| || Sbjct 78096 TTGTCCTGGATCTTCGCCTTCACATTGTCAATAGTGTCAGATGACTCGACTTCCAGAGTT 78155 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || |||| || || |||||||| ||||| Sbjct 78156 ATAGTTTTCCCGGTCAGCGTCTTAACAAAAATTTGCAT 78193 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || | ||| ||||| || || |||||||| | || |||| Sbjct 78204 AGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCAAGCGTTCGT 78263 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| || ||||||||||| || || || || || || | |||| || || Sbjct 78264 CCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCT 78323 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | || ||||| | ||||| |||| |||| Sbjct 78324 TTGTCCTGGATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCACTTCCAACGTA 78383 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || |||| || || |||||||| ||||| Sbjct 78384 ATAGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCAT 78421 Score = 89.7 bits (98), Expect = 4e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || | ||| ||||| || || |||||||| | ||| | || Sbjct 78432 AGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTACGT 78491 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | || || || || || ||||| || || ||||| | |||| || || Sbjct 78492 CCGTCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCT 78551 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| |||||| | | | | ||||| | ||| || |||| || Sbjct 78552 TTGTCTTGAATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAACTTCCAAAGTG 78611 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || ||||| || | ||||| |||||||||||||| ||| Sbjct 78612 ATGGTCTTTCCAGTAAGCGTTTTCACAAAAATCTGCATGGTG 78653 >seq655 Length=45005 Score = 82.4 bits (90), Expect = 6e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 ||||||| || |||||||| | || |||| |||| ||||| || || || || || | Sbjct 27415 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAA 27474 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 ||| |||||||| || | |||| || |||||||| |||||| || ||| | Sbjct 27475 TCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTAT 27534 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | | || || | || ||||| | || || ||||| || || | ||||| || | Sbjct 27535 CGATGGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTTTTGACGA 27594 Query 48757 AAATCTGCAT 48766 |||||||||| Sbjct 27595 AAATCTGCAT 27604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380920213174635