Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2423 163 1e-35 >seq2423 Length=50609 Score = 163 bits (180), Expect = 1e-35 Identities = 317/468 (68%), Gaps = 0/468 (0%) Strand=Plus/Minus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 || |||||||||||| ||| || || | || || | |||||| | ||| || Sbjct 20235 TTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGG 20176 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTT 26008 ||||| | |||||||||||||||| |||| ||| ||||| |||||||| | Sbjct 20175 ATCCAAAGAGCATAAAATAAATCTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACGT 20116 Query 26009 AGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCT 26068 || || | || ||||| ||||| | ||||| || |||| ||| || |||||| ||| Sbjct 20115 AGTTCCAGAAACTCAAAGATATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGACCCT 20056 Query 26069 TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATT 26128 || | || || ||||||||||| ||||||| || || |||||||| || | |||| Sbjct 20055 TTCCGCTTCCCACCACCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATT 19996 Query 26129 GGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATA 26188 ||||| | |||| | ||| ||| || || | |||| | || || | |||| Sbjct 19995 GGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGTTGGTGGAGCGAATA 19936 Query 26189 TCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACT 26248 | | | | | || || || |||||||| ||||||||| ||||| | | | Sbjct 19935 TTGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATTGTTTCAGC 19876 Query 26249 GTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAAT 26308 || ||| |||| || | || |||| ||| ||| ||||| |||||| || |||||| Sbjct 19875 GTGTCGTAAATGCCGTCGATAGAATCATCTTGCATGGATAATAGAAAACACGACGATAAT 19816 Query 26309 TGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTA 26356 || | ||| ||||| | ||| || | ||||| || ||||| ||| Sbjct 19815 TGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCGTA 19768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253028450700875