Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq25 127 2e-24 seq3359 96.9 3e-15 >seq25 Length=104834 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| ||||| || || |||||||||||| | ||||| ||| | | Sbjct 78421 ATGCAAATTTTTGTTAAGACGCTGACTGGGAAAACTATTACGTTGGAAGTGGAATCTTCA 78362 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| |||||||||||||| ||||| || || Sbjct 78361 GATACTATCGACAATGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCAGACCAG 78302 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || |||||||| ||||| ||||| || ||| | | ||||| ||| Sbjct 78301 CAACGTCTAATTTTTGCCGGTAAACAACTGGAAGACGGACGAACGCTTGCGGATTACAAC 78242 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || || ||||| || | ||||||||| Sbjct 78241 ATCCAGAAAGAATCAACGTTGCACTTGGTG 78212 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| ||||| ||||| |||||||| || || ||||| || | | Sbjct 78193 ATGCAAATTTTTGTTAAGACGCTGACCGGGAAAACTATAACTCTGGAAGTCGAGTCATCT 78134 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| |||||||||||||| ||||| || || Sbjct 78133 GACACTATTGACAATGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCAGACCAG 78074 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || |||||||| ||||| ||||| || ||| | | ||||| ||| Sbjct 78073 CAACGTCTAATTTTTGCCGGTAAACAACTGGAAGACGGACGAACGCTTGCGGATTACAAC 78014 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| || || || || || || ||||| Sbjct 78013 ATTCAGAAAGAGTCTACGCTTCATCTGGTG 77984 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||| ||| | |||||||| || || || || || || | ||||| || | Sbjct 78652 ACCATGCAGATTTTTGTGAAAACGCTTACTGGAAAGACCATCACTTTGGAAGTTGAGTCT 78593 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | ||||| ||||| ||||||||||||||||| ||||| ||| Sbjct 78592 TCAGACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCTGAT 78533 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || |||||| ||||||| || || ||||| || || || | | | | ||||| Sbjct 78532 CAGCAACGTCTGATCTTCGCTGGAAAACAACTAGAAGACGGACGTACTCTTGCGGATTAC 78473 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| || || ||||| || | ||||||||| Sbjct 78472 AACATCCAGAAAGAATCAACGTTGCACTTGGTG 78440 >seq3359 Length=441171 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAG 24790 || ||||| ||||| |||||||||||| | | ||||| | || | || || ||| Sbjct 430219 GGAAAAACAATTACACTCGAAGTAGAATCAGCGGACACGATTGACAATGTCAAGAGCAAG 430278 Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 || |||||||| |||||||| ||||| || ||||||||| | || |||||||| ||||| Sbjct 430279 ATTCAAGACAAGGAAGGAATTCCTCCTGACCAACAACGTCTAATTTTTGCCGGAAAACAA 430338 Query 24851 CTGGAGGA 24858 || || || Sbjct 430339 CTTGAAGA 430346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449876539168600