Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq25 127 2e-24 >seq25 Length=104834 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| || || | || || ||||| ||||| | ||| ||| || Sbjct 78422 AATGCAAATTTTTGTTAAGACGCTGACTGGGAAAACTATTACGTTGGAAGTGGAATCTTC 78363 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| ||| | | || || |||||| ||||||||||| | || || || Sbjct 78362 AGATACTATCGACAATGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCAGACCA 78303 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | || |||| ||| |||||||| ||||| || | |||| | ||||||||||| Sbjct 78302 GCAACGTCTAATTTTTGCCGGTAAACAACTGGAAGACGGACGAACGCTTGCGGATTACAA 78243 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||| || |||||||| ||||||||| ||||| || | || || || |||| Sbjct 78242 CATCCAGAAAGAATCAACGTTGCACTTGGTGCTACGTCTTCGTGGTGGAA 78193 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| || || | ||||| ||||| || || | ||| ||| | Sbjct 78194 AATGCAAATTTTTGTTAAGACGCTGACCGGGAAAACTATAACTCTGGAAGTCGAGTCATC 78135 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || ||| | | | | || || |||||| ||||||||||| | || || || Sbjct 78134 TGACACTATTGACAATGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCAGACCA 78075 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | || |||| ||| |||||||| ||||| || | |||| | ||||||||||| Sbjct 78074 GCAACGTCTAATTTTTGCCGGTAAACAACTGGAAGACGGACGAACGCTTGCGGATTACAA 78015 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTG 110482 |||||| ||||| |||||| | || ||||| Sbjct 78014 CATTCAGAAAGAGTCTACGCTTCATCTGGTG 77984 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| ||||| | || || || ||||| || | ||| ||| || Sbjct 78649 ATGCAGATTTTTGTGAAAACGCTTACTGGAAAGACCATCACTTTGGAAGTTGAGTCTTCA 78590 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | ||||| |||||| ||||||||||| | || ||||| Sbjct 78589 GACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 78530 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | || || ||||| || || || | | || | |||||||||||| Sbjct 78529 CAACGTCTGATCTTCGCTGGAAAACAACTAGAAGACGGACGTACTCTTGCGGATTACAAC 78470 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 || || |||||||| ||||||||| ||||| || | || || || |||| Sbjct 78469 ATCCAGAAAGAATCAACGTTGCACTTGGTGCTACGTCTTCGTGGTGGAA 78421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412822757006285