Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq25 143 2e-29 >seq25 Length=104834 Score = 143 bits (158), Expect = 2e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||| ||||||||| || ||||| |||||||| |||||||||| || || Sbjct 77978 ACGAAGCACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCC 78037 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || |||||||| || ||| | || | | |||||| || || ||||| || ||||| Sbjct 78038 GTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTT 78097 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| | || | ||||||||| || ||||| |||||||| Sbjct 78098 GTCCTGGATCTTCGCCTTCACATTGTCAATAGTGTCAGATGACTCGACTTCCAGAGTTAT 78157 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||||| || || | || |||||||| || |||||| Sbjct 78158 AGTTTTCCCGGTCAGCGTCTTAACAAAAATTTGCATT 78194 Score = 136 bits (150), Expect = 3e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| || | ||| |||||||| || ||||| |||||||||| || || Sbjct 78434 ACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTACGTCC 78493 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || |||||||| ||||| | |||| | ||||||||| || ||||| || ||||| Sbjct 78494 GTCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTT 78553 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | || ||| | || | ||||| ||| || ||||| | ||| | Sbjct 78554 GTCTTG-AATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAACTTCCAAAGTGA 78612 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| | ||||| ||||| |||||||| Sbjct 78613 TGGTCTTTCCAGTAAGCGTTTTCACAAAAATCTGCAT 78649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385201617753045