Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq655 93.3 4e-14 seq25 89.7 5e-13 >seq655 Length=45005 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 133471 CTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 |||| || || |||||||| | | ||| || || ||||| | || || || ||| | Sbjct 27415 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCG--TCCTCCAATTGTTTTCCTGCGAA 27472 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||| | ||||| ||||||||||| || ||||||||||| ||||| ||| | | Sbjct 27473 AATCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATT 27532 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 || | ||||||| | || || || | |||| ||||| ||||| || ||||| || Sbjct 27533 ATCGATGGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTTTTGAC 27592 Query 133649 GAAAATCTGCAT 133660 |||||||||||| Sbjct 27593 GAAAATCTGCAT 27604 >seq25 Length=104834 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || |||||||| | | ||| ||| || || || || || Sbjct 77997 GTAGACTCTTTCTGAATGTTGTAATCCGCAAGCGTTCGTCCGTCTTCCAGTTGTTTACCG 78056 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || |||| || || |||||||| ||||| || ||||| ||||| |||||| ||| Sbjct 78057 GCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTGGATCTTCGCCTTC 78116 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | ||| || || | || | ||||| |||||||| || Sbjct 78117 ACATTGTCAATAGTGTCAGATGACTCGACTTCCAGAGTTATAGTTTTCCCGGTCAGCGTC 78176 Query 133644 TTTACGAAAATCTGCAT 133660 || || ||||| ||||| Sbjct 78177 TTAACAAAAATTTGCAT 78193 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/201 (70%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || || |||||||| || |||||||| | | || ||| ||| || || || || | Sbjct 78453 GTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGT--ACGTCCGTCTTCTAGTTGTTTTC 78510 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || || ||||| || ||||| || ||||| ||||| ||||| || Sbjct 78511 CAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCCT 78570 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | |||||| | | ||| || || | |||| ||| || || || || | Sbjct 78571 TTACATTATCGATCGTGTCTGAAGACTCAACTTCCAAAGTGATGGTCTTTCCAGTAAGCG 78630 Query 133642 TTTTTACGAAAATCTGCATGG 133662 |||| || ||||||||||||| Sbjct 78631 TTTTCACAAAAATCTGCATGG 78651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483398169863800