Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq655 131 1e-25 seq25 118 7e-22 seq821 87.8 1e-12 >seq655 Length=45005 Score = 131 bits (144), Expect = 1e-25 Identities = 145/191 (76%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619 ||||||| ||||||||||| | ||| || || |||| |||||||||||||| || |||| Sbjct 27415 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAA 27474 Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679 |||||||||| || || | || | ||||| ||||| ||| ||| ||| |||| Sbjct 27475 TCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTC-ACATTA 27533 Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738 || | ||||||| |||||| || |||| ||||| ||||| || || | ||||| || Sbjct 27534 TCGATGGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTTTTGACG 27593 Query 33739 AAGATCTGCAT 33749 || |||||||| Sbjct 27594 AAAATCTGCAT 27604 >seq25 Length=104834 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| ||| || || |||||| || ||||||||||| | Sbjct 77966 ACCACCACGAAGACGAAGCACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGC 78025 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| |||| |||| |||||| ||||||||||| | ||| ||||| ||| | || Sbjct 78026 AAGCGTTCGTCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGG 78085 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| || ||| ||| |||| ||| | ||||| ||| || | Sbjct 78086 AATTCCTTCTTTGTCCTGGATCTTCGCCTTC-ACATTGTCAATAGTGTCAGATGACTCGA 78144 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || ||||| || || | ||| || ||||| || ||||| Sbjct 78145 CTTCCAGAGTTATAGTTTTCCCGGTCAGCGTCTTAACAAAAATTTGCAT 78193 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||||| |||||| || | || ||||| || ||||||||||| | Sbjct 78195 CCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCA 78254 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || ||| |||| |||| |||||| ||||||||||| | ||| ||||| ||| | || Sbjct 78255 AGCGTTCGTCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGA 78314 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| || ||| ||| |||| ||| | || || |||||||| Sbjct 78315 ATTCCTTCTTTGTCCTGGATCTTCGCCTTC-ACATTGTCGATAGTATCTGAAGATTCCAC 78373 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||| || ||||| || || | ||| || ||||| || ||||| Sbjct 78374 TTCCAACGTAATAGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCAT 78421 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||||| |||||| || | || ||||| || ||||||||||| | Sbjct 78423 CCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCA 78482 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || ||| |||| || | ||||||||| || || |||| ||| |||||||| | || Sbjct 78483 AGAGTACGTCCGTCTTCTAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGA 78542 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||| || | | |||| || | ||||| || || || Sbjct 78543 ATTCCTTCTTTGTCTTGAATCTT-GGCCTTTACATTATCGATCGTGTCTGAAGACTCAAC 78601 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 || | ||||| || || || || | |||||| ||||| |||||||| || Sbjct 78602 TTCCAAAGTGATGGTCTTTCCAGTAAGCGTTTTCACAAAAATCTGCATGGT 78652 >seq821 Length=42298 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | || |||| |||| ||||| ||||| ||||| || ||||||||||| | Sbjct 36000 CACCACCGCGTAATCGTAGAACCAGATGTAACGTGCTTTCTTTCTGAATGTTGTAATCCG 35941 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | ||| || | || ||||||||||| || |||||||| | |||||| || || | | Sbjct 35940 CTAATGTTCGACCATCTTCCAATTGTTTCCCAGCAAAAATGAGACGCTGTTGGTCCGGGG 35881 Query 33641 GCACACCT 33648 | | |||| Sbjct 35880 GAATACCT 35873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328688997230400