Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2423 291 1e-73 seq3629 273 3e-68 >seq2423 Length=50609 Score = 291 bits (322), Expect = 1e-73 Identities = 1187/1852 (64%), Gaps = 44/1852 (2%) Strand=Plus/Minus Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462 ||| || ||||||||||| || || || |||||| ||||| ||||||||||||| Sbjct 21397 TGTTCGGAGATAGTACATTCCTGTCTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGA 21338 Query 68463 TGTTAGTTTGGAATAAC--TTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCG 68520 || ||||| | | || | || ||||| || |||||||| | |||||||| ||| Sbjct 21337 AGTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTTAGTGATTGACTCTGACAA 21280 Query 68521 ATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATA 68580 ||| | ||||||| ||| || ||||| | | ||| |||||| |||||||||| Sbjct 21279 ATGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACT 21220 Query 68581 GTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCA 68637 || || | | | ||| | || | |||| | ||||||| | ||| || | | Sbjct 21219 GTTTTGTACTTTTCTTTCACATGAGAAGGAATTTCAGCGATATTTTGTACGGAACCGCGA 21160 Query 68638 TCGGATATAATTATATTCTTGATCTCATCAT-TCCACAATTTTCTCTCCGTTAAAACTCT 68696 ||| | ||| |||| | || | || ||||||| || |||| | || |||| Sbjct 21159 TCGCGAAGGATTTGATTCCGAACGTC-TGATGTCCACAAATTCATCTCAAT--AAGCTCT 21103 Query 68697 A--AGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATA 68754 | ||||| || || ||| |||||| |||| | || | ||| || | || Sbjct 21102 TCCATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATG 21043 Query 68755 TTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTT 68814 || || | || || | ||| || ||| || ||||||||||| ||||| || ||| Sbjct 21042 TTGGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTT 20983 Query 68815 GGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGA 68874 ||||| || || | || ||| |||| | || || || | || ||||| | Sbjct 20982 GGCATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAAC 20923 Query 68875 TGTTTCCAATCCCAAAGATCAGAT---GGTACAACATTCCAAAGATCGTATTGTAGAATT 68931 || ||||||||||| || | || || | || | ||| | ||| |||| | || Sbjct 20922 TGCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATA 20863 Query 68932 CCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCC---TTCCTGTTCAGCTAGT 68988 || ||| | ||||||| ||| | || || ||||| |||| || || | | Sbjct 20862 CCTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGAGTTCCCGT---GCCAAT 20806 Query 68989 TCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 69048 || || || | || || |||| || ||||| ||||| | || ||||| || Sbjct 20805 TCCATGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCG 20746 Query 69049 TGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGA 69108 | || || || || |||||| | | || | ||| | ||| || | || ||| Sbjct 20745 CGAGCAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGA 20686 Query 69109 ACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAA 69168 || || || || || |||| ||||| || ||| || ||||| ||||| |||||| Sbjct 20685 ACGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAA 20626 Query 69169 TAATTAATATCTATAATTTTATTAAGATTT--CGGACTACTACTTTAACCACGTCCTTTA 69226 ||||| | ||| || ||||| || |||||| || | || | ||| | || | || Sbjct 20625 TAATTGAGATCAATGATTTTGTTGAGATTTTTCGTA--ACGATTTTTGTGATTTCGTATA 20568 Query 69227 GTTTGAGAAAATCAAATCGTCCATCTATAACAAACATATT--CAGTGCTACAGATGCTAG 69284 ||| ||| | |||| || ||| ||| | || || || ||| | || || | Sbjct 20567 ATTTTGCAAACTGAAAT--TCTTTCTGATACACAAATTTTGACAATGCGATGGAAGCCAA 20510 Query 69285 ATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACT 69344 ||| || ||||| || || || || | || || | || || || || ||||| || Sbjct 20509 ATTGCATACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCT 20450 Query 69345 ACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAG 69404 || || || || ||||| |||||||| || ||||| ||||| |||||||| Sbjct 20449 TGATCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAG 20390 Query 69405 AATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGC 69464 ||| |||| || || || ||||||||| || | ||| | ||||| || | || Sbjct 20389 CATATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGG-----CAAACCACAATTGC 20335 Query 69465 ATTTATT--ACGGTCTT----GTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTC 69518 || || ||||| | || | || | || || | | ||||| | || Sbjct 20334 TGGGCTTTGACAGTCTTTCGGGCAATGTTT-TGAGACTCGTACTTTTCATATAACGCATC 20276 Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578 ||||| |||||| |||| | || ||| || || ||||| | || ||| Sbjct 20275 AAATTCGCTTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCA 20216 Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAG 69638 | | | || | || ||||||||||| |||||||| ||||||||||| ||| | Sbjct 20215 TTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAA 20156 Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698 ||||| | || || ||||||||| ||| || || || |||||||| | || Sbjct 20155 ATCTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGAT 20096 Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGC-CATGACTCCCGGTCGTTTATTTCCTCCCT 69757 ||| | |||||| || |||||||| || || | ||| || || || || || | Sbjct 20095 ATCCGCATGCCAGGGCTCTAGATAAATTGCAAAAGAC-CCTTTCCGCTTCCCACCACCTT 20037 Query 69758 GATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATT 69817 |||| | ||||| || |||| ||| | || | ||||| |||| ||| ||||| || Sbjct 20036 GATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAAC 19977 Query 69818 TACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTA 69877 | ||||| || || ||||||||| | | ||||||||| |||| | || | Sbjct 19976 TTCCATTCGTCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAA 19917 Query 69878 TTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTA 69937 | || || ||| || || || ||||| |||||| ||||| || || || || | Sbjct 19916 TACCGCCAGCCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGA 19857 Query 69938 TGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCG 69997 | ||||||| |||| | |||||||| || | ||| | | ||||||| Sbjct 19856 TAGAATCATCTTGCATGGATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCG 19797 Query 69998 CATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTT 70057 |||| || | || |||| ||| || || || | |||| || | | | || |||| Sbjct 19796 CATTGAAAAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTT 19737 Query 70058 CAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCT 70117 | | | | | || | || | | || || || | || || ||||| | |||||| | Sbjct 19736 CCAAAACGGCATCCAAATTCTCTTTGTGTATGCCGACAGCCACTCGCATTATCATATGTT 19677 Query 70118 GAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAA 70177 | || ||||| | ||| ||| | |||||| || ||||| ||||||||||||| Sbjct 19676 GTGGGCGTTCACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAA 19617 Query 70178 ACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229 | |||||||||| ||| ||||||||| || ||||| | ||||| || Sbjct 19616 AGCCAAAATAGTCGTAATCAAAGTCTCTATCACCGATAATGGCGGAATTGAG 19565 >seq3629 Length=149247 Score = 273 bits (302), Expect = 3e-68 Identities = 610/899 (68%), Gaps = 35/899 (4%) Strand=Plus/Plus Query 39332 TATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATG 39391 ||||| |||||||||||||| ||||| || ||||| |||| || || || | ||||| Sbjct 30653 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCATC 30712 Query 39392 AAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTC-TGAAATCAATCT 39450 | ||||| ||||||| || | |||| || | | || | | | || || ||||| Sbjct 30713 CAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGCCAAGTGCATGTAA-CAATCG 30771 Query 39451 ATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAAC 39510 ||| || ||||| || |||||| ||||| |||||||||| || || | || Sbjct 30772 ATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGAC 30831 Query 39511 TGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG-ATG 39569 ||| || | || || ||| |||| ||||||| ||||| || | || || | ||| Sbjct 30832 TGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCATG 30891 Query 39570 TTACTACCTCATCACTCGGTGGATGCAA---TAAATGTTTAAA---CATTAAGCAGGCGA 39623 | || | | || |||| || || |||| | ||| | || || | Sbjct 30892 --AATAGAGCCT---TC--TGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAA 30944 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 ||||||||||||| || ||||| | ||| || | || || ||||| |||||||||| Sbjct 30945 AGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCA 31004 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA-AAAGATCCAGAAAAGAAGATGCCT 39742 | | || || || || ||||||||||| | |||| || ||||| || || ||||| ||| Sbjct 31005 TCAATCCTCGTTTCTTCAGCCAAAATATAG-AGCAGAATGATCCGGAGAAAAAGATTCCT 31063 Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTAT----CCA 39798 || || || ||||| || || | ||| ||| | ||| | | | || || ||| Sbjct 31064 TCGACGGCCGCAAAGGCTACCACTCTTTCTGC-AAACGAGGCATACTTTGGATCGCACCA 31122 Query 39799 CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 ||| ||||| | ||||| || | || || || |||||||| || || | | Sbjct 31123 TTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCATAGTAA 31182 Query 39859 ATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGA 39918 || |||||||| |||||| | |||||||| || || | ||||| ||| || Sbjct 31183 ATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGA 31242 Query 39919 ATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTAC 39978 || || ||||| || || || || ||||| ||||| |||| ||||| | ||||| || Sbjct 31243 GTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGATTTGAAC 31302 Query 39979 CT--CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAA 40036 || ||| ||| || | || | ||||||||| || || |||||||| || ||||| Sbjct 31303 CTCACTGCTGAAATTCAT--GGCGAGATTTTCATTAACAATCCCATCACTGGCTGCAAAG 31360 Query 40037 AATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGT-CAATTTATT---CCAGTC 40092 || ||||| || ||||| ||||| | | | |||| ||| | || |||| |||||| Sbjct 31361 AAGGCCAACACGTGTTTGATAAAGTGTCTCTCAT----TGTCCGATATATTAAGCCAGTC 31416 Query 40093 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTT 40152 ||| || || | | ||| | |||||| || |||||||| |||||||| || || Sbjct 31417 ATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTT 31476 Query 40153 GTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGAtttt 40211 ||||||| ||| || ||| | |||||| ||||| | ||||| | || ||||||| Sbjct 31477 ATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGATTTT 31535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686876644081800