Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq25 114 1e-20 >seq25 Length=104834 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 |||| ||| | |||||| ||||| ||||| ||||| || | || | | || ||||||| Sbjct 77985 ACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATC-CGCAAGCGTTCGTCCGTCTTC 78043 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 || ||||||||||| |||| ||||| || || || || || | || ||||| || Sbjct 78044 CAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTG 78103 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| |||| | || | |||||| | | || ||||| |||||||||| ||| Sbjct 78104 GATCTTCGCCTTCACATTGTCAATAGTGTCAGATGACTCGACTTCCAGAGTTATAGTTTT 78163 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || || ||||| |||||||| Sbjct 78164 CCCGGTCAGCGTCTTAACAAAAATTTGCAT 78193 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 ||||| || ||||| || ||||| || || ||||| || | || | | || ||||||| Sbjct 78213 ACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATC-CGCAAGCGTTCGTCCGTCTTC 78271 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 || ||||||||||| |||| ||||| || || || || || | || ||||| || Sbjct 78272 CAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCCTG 78331 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| |||| | || | ||| |||| | ||| ||||| | || |||| ||| Sbjct 78332 GATCTTCGCCTTCACATTGTCGATAGTATCTGAAGATTCCACTTCCAACGTAATAGTTTT 78391 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || || ||||| |||||||| Sbjct 78392 CCCAGTCAGCGTCTTAACAAAAATTTGCAT 78421 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/226 (70%), Gaps = 3/226 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 ||||| || ||||| || ||||| || || ||||| || | || | | || ||||||| Sbjct 78441 ACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATC-CGCAAGAGTACGTCCGTCTTC 78499 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 || ||||| || ||| | || ||||| || ||||| || || | || ||||| || Sbjct 78500 TAGTTGTTTTCCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTG 78559 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| || | | || | ||||||| | |||||||| | ||| || | || Sbjct 78560 AATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAACTTCCAAAGTGATGGTCTT 78619 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAAAAATTTA 27263 || || || ||||||||||| || ||||| | || | ||||||| Sbjct 78620 TCCAGTAAGCGTTTTCACAAAAATCTGCAT-GGTGATTCAAATTTA 78664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424915005064440