Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3629 105 8e-18 seq2423 95.1 1e-14 >seq3629 Length=149247 Score = 105 bits (116), Expect = 8e-18 Identities = 187/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087 || || || || ||||| |||||| ||||| || ||||| || || ||||| | || Sbjct 30953 TGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCT 31012 Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147 || ||||||| ||| || || | || ||||| || ||||| ||||| || || || | Sbjct 31013 CGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCC 31072 Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCC 130207 || || || | | | || ||||| ||| |||||| ||| |||| |||| |||| Sbjct 31073 GCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCACCATTTCAACGCC 31132 Query 130208 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG-AGTTCCTTCTT 130266 || || || || || | ||||||| || | ||||| || || | | || || Sbjct 31133 CATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG-CATAGTAAATGCTGTTT 31191 Query 130267 TTCTGATGGATCTTTGATGTACTTATCTAT 130296 ||| | ||||||||||||||| |||| || Sbjct 31192 TTCGGTTGGATCTTTGATGTATGTATCAAT 31221 >seq2423 Length=50609 Score = 95.1 bits (104), Expect = 1e-14 Identities = 312/481 (65%), Gaps = 7/481 (1%) Strand=Plus/Minus Query 119028 TCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAG 119087 || || || || ||||| || || || |||||||| || || | || | ||| || Sbjct 20205 TCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAAATCTCGTGCT 20146 Query 119088 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 119147 ||| ||||| || ||||| ||| | |||| ||| || | ||||||||| ||| Sbjct 20145 CGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCATGC 20086 Query 119148 CACGGTTCCAGGTACACCGCGATTGACCCCTTACGA---CGACCAGCCTGGTTTACATAC 119204 || || || || || | || | ||||| || || | |||| | || | || || Sbjct 20085 CAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCACCTTGATCAACGTAT 20026 Query 119205 CTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTC 119264 | || ||| | || || || ||||||||||||| || |||| || ||||| ||| Sbjct 20025 CGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCGTC 19966 Query 119265 CCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGC--ATACCAATACCCCCTG 119322 || |||||| | || ||| | || || |||| | | | |||||||| || | Sbjct 19965 CCGCGAATATAACTGTTGGTGGAGC-GA-ATATTGGAAATACTGACGCCAATACCGCCAG 19908 Query 119323 CCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCAC 119382 |||||||||| || ||| || | | || || |||| || || ||||| || ||| Sbjct 19907 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCAT 19848 Query 119383 CCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGA 119442 | | | | | || || || ||| | ||| || | || || || || ||||| | Sbjct 19847 CTTGCATGGATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAA 19788 Query 119443 GAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGG 119502 | || || || || || | || | ||| ||||| | || || || ||||| |||| Sbjct 19787 GCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGG 19728 Query 119503 C 119503 | Sbjct 19727 C 19727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618406249502200