Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq3502 89.7 4e-13 >seq3502 Length=87171 Score = 89.7 bits (98), Expect = 4e-13 Identities = 181/269 (67%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 111667 AGTTTTGGAAAGGGGGTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTT 111726 ||| ||||||| ||| || | || ||| ||| |||| || | | |||||| Sbjct 15357 AGTGTTGGAAACGGGCGTGGAGTGCGTTCAAGTTGTGCCTGTAGCGGTTCCAAGTGATTC 15298 Query 111727 AAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATG 111786 | || | ||| |||||||| || ||| | || || | || | | | |||| | | Sbjct 15297 ATGTAGATATGGGCATCTCCGATCACATGAACAAACTCGCCGGGTTGGAGATCAGTCACG 15238 Query 111787 TGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCC 111846 ||||||||||| | ||| | || ||| |||||||| || ||||| || || || || Sbjct 15237 TGTGCAATCATTTTTGTCAAAAGCGCGTAGCTAGCAATATTGAATGGAACGCCCAGACCA 15178 Query 111847 ATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGA 111906 ||||| | |||| || || | || ||||||| || | || || |||||||| Sbjct 15177 ATATCAGCGGATCGCTGGTACATTTGGCATGATAATTCCCCATTTGCAACGTAAAATTGG 15118 Query 111907 CAAAGTACATGACAAGGAGGCAATGCCAT 111935 || | | |||||| ||||| |||||||| Sbjct 15117 CACATGAGATGACAGGGAGGTAATGCCAT 15089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391927710745435