Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3629 212 5e-50 >seq3629 Length=149247 Score = 212 bits (234), Expect = 5e-50 Identities = 597/903 (66%), Gaps = 18/903 (2%) Strand=Plus/Plus Query 4244 ACAAACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTC 4303 || ||||||| |||| ||||| || || || || || || || ||||| |||| Sbjct 30634 ACCAACACCAGATTTCGCATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTG 30693 Query 4304 TAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACT 4362 | ||||| | ||||| | ||||| ||||||| |||| || | || | || | Sbjct 30694 CAGAGAAATCATATCCATCCAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGCC 30753 Query 4363 TTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGT 4422 || || | |||||| || || ||||| || || || || | ||| | | | Sbjct 30754 A-AGTGCATGTAACAATCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAAT 30812 Query 4423 TAATTCCAATTAATCTC-ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACG 4481 | |||||||||| ||| || || || | | | | ||| |||||||| || | ||| Sbjct 30813 TCATTCCAATTAG-CTCGACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACG 30871 Query 4482 GCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAA-A 4540 || || | || || | | || ||| | | |||||||| | || || | | Sbjct 30872 GCGTCGGAAATGATTGCATGAATAGAGCCTTCTGGAAGCTTATTTACCA-GTTTCGAGTA 30930 Query 4541 CAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAA 4600 || | ||| ||||| |||||||| | ||||| || | || || || || || ||||| Sbjct 30931 CATCAGACATGCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAA 30990 Query 4601 CGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGA 4660 | ||| ||||| || |||| || || ||||||||||||| | ||||| || || Sbjct 30991 GCAAAGTCCAGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGA 31050 Query 4661 AAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAG-CTGGCTT 4719 || || || ||||| ||||| ||||| ||||| | || | |||||| | ||| Sbjct 31051 GAAAAAGATTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTT 31110 Query 4720 TGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779 || | | |||||| || ||||| | ||||| || |||||||||| ||||| | | Sbjct 31111 TGGATCGCA-CCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAA 31169 Query 4780 TAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839 | ||| | ||| | |||||| ||| |||| || || || || || | || Sbjct 31170 TCGCGCATAGTAAATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACG 31229 Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899 ||||| ||| || |||||||||||||| ||||| || ||||| |||||||||| ||||| Sbjct 31230 AATACACTTCCGAGTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTT 31289 Query 4900 CTGTTACTTGAACTTCGTTAC--AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTC 4957 | | | |||||| || | | ||| || | | | ||||| || || || || || Sbjct 31290 CCGGGATTTGAACCTCACTGCTGAAATTCAT--GGCGAGATTTTCATTAACAATCCCATC 31347 Query 4958 ACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGT---ACTGTTCGTCAGGCTTAAG 5014 |||||||||||| || ||||| || || ||||||| || | ||| | || Sbjct 31348 ACTGGCTGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATA-- 31405 Query 5015 TTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGC 5074 || ||||| || || | ||||| | |||||| | |||||||| || Sbjct 31406 -TTAAGCCAGTCATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGC 31464 Query 5075 TTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 || ||||| || ||||| |||||| |||| | || ||||||| || |||||| | Sbjct 31465 CTCTGCTTTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCG 31524 Query 5135 GTT 5137 ||| Sbjct 31525 GTT 31527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427030108522085