Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2423 349 5e-91 seq3629 241 2e-58 >seq2423 Length=50609 Score = 349 bits (386), Expect = 5e-91 Identities = 1442/2248 (64%), Gaps = 56/2248 (2%) Strand=Plus/Minus Query 75406 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 75465 ||| || ||||||||||| || || || ||||| ||||| ||||||||||||| Sbjct 21397 TGTTCGGAGATAGTACATTCCTGTCTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGA 21338 Query 75466 TGTTAGTTTGGAATAAC--TCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCG 75523 || ||||| | | || |||| ||||| || |||||||| | || ||||| ||| Sbjct 21337 AGTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTTAGTGATTGACTCTGACAA 21280 Query 75524 ATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATA 75583 ||| | ||||||| ||| || ||||| | | ||| | |||||| |||||||||| Sbjct 21279 ATGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACT 21220 Query 75584 GTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCA 75640 |||||| | || ||| | || | |||| | | ||||||| | ||| |||| | Sbjct 21219 GTTTTGTACTTTTCTTTCACATGAGAAGGAATTTCAGCGATATTTTGTACGGAACCGCGA 21160 Query 75641 TCAGATATAATTGTATTCTTGATCTCATCAT-TCCACAATTTTCTCTCGGTTAAAACTCT 75699 || | ||| |||| | || | || ||||||| || |||| | || |||| Sbjct 21159 TCGCGAAGGATTTGATTCCGAACGTC-TGATGTCCACAAATTCATCTCAAT--AAGCTCT 21103 Query 75700 A--AGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATA 75757 | ||||| || |||||| ||||||||||| | || | |||| || | || Sbjct 21102 TCCATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATG 21043 Query 75758 TTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTC 75817 || || | || || | ||| || || || | ||||||||| ||||| || || Sbjct 21042 TTGGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTT 20983 Query 75818 GGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGA 75877 ||||| || || | || ||| |||| || || || || | || ||||| | Sbjct 20982 GGCATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAAC 20923 Query 75878 TATTTCCAATCCCAAAGATCTGAT---GGTACAACATCCCAGAGATCGTATTGTAGAATT 75934 | ||||||||||| || | || || | || | ||| | ||| |||| | || Sbjct 20922 TGCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATA 20863 Query 75935 CCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCG---TCCTTTTCAGCTAGT 75991 || ||| | ||||||| ||| | ||||| | ||| ||| | || | | Sbjct 20862 CCTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGAGTTCCCGT---GCCAAT 20806 Query 75992 TC---GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGA 76048 || | || || || | ||| || |||| || ||||| ||||| | || || || Sbjct 20805 TCCATGGAA---GCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGC 20749 Query 76049 TCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCC 76108 || | || | || ||||| ||| | | || | ||| | ||| || || || Sbjct 20748 TCGCGAGCAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCT 20689 Query 76109 TGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGG 76168 ||||| || || ||||| |||| ||||| || |||| | || ||||| ||||| || Sbjct 20688 TGAACGCCGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGA 20629 Query 76169 TAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTT 76228 |||||||| | ||| || ||||| ||||||||| | ||| | ||| | || | | Sbjct 20628 TAATAATTGAGATCAATGATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTAT 20569 Query 76229 AGTTTGAGAAAATCAAATTTTCCATCTATCACAAACATATTAAGA--GCTATAGATGCTA 76286 | ||| ||| | ||||| | ||| ||| | || || | | || || || || | Sbjct 20568 AATTTTGCAAACTGAAATTCTT--TCTGATACACAAATTTTGACAATGCGATGGAAGCCA 20511 Query 76287 GATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTAC 76346 ||| || || || || || || | | | || | || || || ||| ||||| | Sbjct 20510 AATTGCATACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGC 20451 Query 76347 TACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAA 76406 | | || ||||||||||| || || ||| || ||||| | ||| || |||| Sbjct 20450 TTGATCGAATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAA 20391 Query 76407 GAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG 76466 | | | |||| ||||| || |||||||| || | ||| | || || || | | Sbjct 20390 GCATATACGGCGTTCCGGTCTCAATCTGACTATCCAAAATGG-----CAAACCACAATTG 20336 Query 76467 CTTTTATTATAGATTTGTATCGCTTCTCTCTT-----TCATATTGTGTATATAACCGTTC 76521 || || | | | | | | | || || || | | ||||||| || Sbjct 20335 CTGGGCTTTGACAGTCTTTCGGGCAATGTTTTGAGACTCGTACTTTTCATATAACGCATC 20276 Query 76522 AAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCA 76581 |||||| |||||| |||| | | ||| || |||||||| | || ||| Sbjct 20275 AAATTCGCTTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCA 20216 Query 76582 CTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAG 76641 || | || | || ||||||||||| ||||| || ||||| |||||| ||||| Sbjct 20215 TTCTTGGTTGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAATAA 20156 Query 76642 ATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAAT 76701 |||||| | || | | ||||||||| |||||| || || || ||||| | || Sbjct 20155 ATCTCGTGCTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGAT 20096 Query 76702 ATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGT-CGTTTATTACCTCCCT 76760 ||| | |||||| || |||||||| || | || || |||| | || || ||| || | Sbjct 20095 ATCCGCATGCCAGGGCTCTAGATAAATTG-CAAAAGACCCTTTCCGCTTCCCACCACCTT 20037 Query 76761 GATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATG 76820 |||| | |||| || |||| ||| | || | | |||||||| ||| || || || Sbjct 20036 GATCAACGTATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAAC 19977 Query 76821 TACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTA 76880 | ||||| || || ||||||||| | |||||||| |||| | ||| | Sbjct 19976 TTCCATTCGTCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAA 19917 Query 76881 TTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTA 76940 | || || ||| || || || ||||| |||||| ||||| || ||||| || | Sbjct 19916 TACCGCCAGCCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGA 19857 Query 76941 TACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTG 77000 || |||||| |||| | |||||||| || | ||| | || ||||| | Sbjct 19856 TAGAATCATCTTGCATGGATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCG 19797 Query 77001 CATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTT 77060 |||| || | || |||| |||||| || || | |||| || | | | || |||| Sbjct 19796 CATTGAAAAGCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTT 19737 Query 77061 CAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCT 77120 | | ||| || || | || | || || || || ||||| || ||||| | |||||| | Sbjct 19736 CCAAAACGGCATCCAAATTCTCTTTGTGTATGCCGACAGCCACTCGCATTATCATATGTT 19677 Query 77121 GAGGTCGTTCTACAGTCTTAT-TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 77179 | || ||||| ||| ||| | ||| | ||||| || ||||| |||| ||||||| Sbjct 19676 GTGGGCGTTC-ACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTA 19618 Query 77180 AAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCC 77239 || |||||||||| ||| ||||||||| || ||||| | ||||| || || Sbjct 19617 AAGCCAAAATAGTCGTAATCAAAGTCTCTATCACCGATAATGGCGGAATTGAGAGCTTCT 19558 Query 77240 TTATATTTGGTAACAATATCCATG-ACAGTGGTAGAAATAATTGGAGATCGTA-TTCCAT 77297 || | | ||||||| || ||| ||| | | | || | ||||| ||| || | Sbjct 19557 TTGTTCTCCATAACAAT-TCGATGCACATCGTTGGCGATTAATGGAGCGGGTACTTTGGT 19499 Query 77298 --TTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGT 77355 ||| | ||| | || |||||| || || || || || | ||| ||||| Sbjct 19498 GGTTTCGTGCTTATTTTCGTAAAATAA---TTGAATGTTTTCACTGAAGACTTTGTTTGT 19442 Query 77356 TTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCA-TAGTCAGGATGTT 77414 | || |||| ||| || | || |||| |||||| | | ||| | | || ||||||| Sbjct 19441 ATTTTTATGTAAATTGGAAATAGCAATTCGAGCAGCCA-ATTTGGAGAAATCGGGATGTT 19383 Query 77415 GTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTC 77474 |||| ||||| ||||| ||||||| || || || ||||| || || || | Sbjct 19382 GTGTGCTGCAGTAAGCTGCGGTTTCTGCTGCCAATTCGTCCAATTCCGATGTGGTGACGC 19323 Query 77475 CGTTATATAGCCCTTGAATAACTTTCATGGCTATTTTGATAGGATCTACAAACTCGGTGT 77534 | ||| | || ||| |||||| | ||||| || ||||| || | || |||| Sbjct 19322 CCGGATACACGCCAGCAATCACTTTCTGAGATATTTGGACGGGATCAACGTATTCTGTGT 19263 Query 77535 TCAAACCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGACATTCTCCT 77594 | || || || | |||| | || || | |||||||| || || |||| || | Sbjct 19262 TTAAGTTGTAGCAGAGTTTTGTGATTCGCGCAGTGATTTTGTCGAATTTGACGACTTCTT 19203 Query 77595 TACATCCATTTCGTTTAATGACGAACAT 77622 | | ||| | ||||| ||||| |||| Sbjct 19202 TTCGTCCGTCACGTTTGATGACATACAT 19175 >seq3629 Length=149247 Score = 241 bits (266), Expect = 2e-58 Identities = 610/909 (67%), Gaps = 23/909 (3%) Strand=Plus/Plus Query 46345 TATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATA 46404 ||||| || || |||||||| ||||| || ||||| |||| || || || | ||||| Sbjct 30653 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCATC 30712 Query 46405 AAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTC-TGAAATCAGTCT 46463 | ||||| ||||||| | | | ||| | || | | || | | | || || || || Sbjct 30713 CAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGCCAAGTGCATGTAA-CAATCG 30771 Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGAC 46523 ||| || || || || || || ||||| |||||||||| || || | ||| Sbjct 30772 ATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGAC 30831 Query 46524 CGGTAGAGCCTC-CGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCG-AT 46581 || || | || |||| ||| |||||||| || | || || || || || || | || Sbjct 30832 TGGAAGTGAATCTCGTAC-AAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCAT 30890 Query 46582 GTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAA---CATTAAACATGCAAAA 46638 | | | | || ||| | | | | |||| | ||| | ||||||||| Sbjct 30891 GA-ATAGAGCCTTC---TGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAAG 30946 Query 46639 TCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698 |||||||| || |||||||| | ||| || | || || ||||| || |||||||| Sbjct 30947 TCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATC 31006 Query 46699 AGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCT 46758 | ||| || || || ||||||||||||| ||| ||||| || || || || ||||| Sbjct 31007 AATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCG 31066 Query 46759 ACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAATC-CACC-TTT 46816 || ||||| || || || | ||| ||| | | ||||| || || ||| |||| ||| Sbjct 31067 ACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTT-TGGATCGCACCATTT 31125 Query 46817 GA--GCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 | ||||| | || || || | || || || |||||||| || || | || || Sbjct 31126 CAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGC-ATAGTAAAT 31184 Query 46875 Gtt-tttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAAT 46933 | | |||||| |||||| | |||||||| || || | ||||| ||| || | Sbjct 31185 GCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGT 31244 Query 46934 GAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCT 46993 | || ||||| || || || || ||||| ||||| |||| ||||| | || || |||| Sbjct 31245 GTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGATTTGAACCT 31304 Query 46994 CTGTACAAAATCGTTCA--GACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAA 47051 | | | || |||| | | ||| ||||| || || |||||||| || ||||| || Sbjct 31305 CACTGCTGAAA--TTCATGGCGAGATTTTCATTAACAATCCCATCACTGGCTGCAAAGAA 31362 Query 47052 TGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGAT 47111 ||||| || ||||| ||||| | | | |||| | | | ||| ||||||||| || Sbjct 31363 GGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATATTAAGCCAGTCATTCAT 31422 Query 47112 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACAT 47171 || | | ||| | |||||| || ||||| || ||||||||||| |||||||| Sbjct 31423 GTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACAT 31482 Query 47172 ATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTTTTGCAAG 47231 | ||| || ||| | ||| |||||||| | ||||| | || ||||||| | || Sbjct 31483 GTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGATTTTCTCGGAG 31542 Query 47232 TATAGGTTC 47240 | |||||| Sbjct 31543 AAAAGGTTC 31551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712901025758400