Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3629 269 3e-67 >seq3629 Length=149247 Score = 269 bits (298), Expect = 3e-67 Identities = 634/939 (68%), Gaps = 26/939 (3%) Strand=Plus/Plus Query 23160 TTAAAAATCTTCATCTAAAGTGAATT-TCACTGCTTTATCACTATTCAT-AACACCCATT 23217 ||| |||||| ||||||||||||| | || |||| || | || |||||| | Sbjct 30589 TTAGAAATCTGCATCTAAAGTGAAAACTTGCTCCTTTG-CAG-AGACACCAACACCAGAT 30646 Query 23218 TTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTT 23277 || |||||| ||||| ||| | || ||||| ||||| || || | | || || | Sbjct 30647 TTCGCATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATA 30706 Query 23278 TCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTT-TAA 23336 ||||| | ||||| |||||||||| | ||||| | | | | || | | | ||| Sbjct 30707 TCCATCCAGTCAAAGGGATTAGAAGCGTGATATA-ACTTGCTGACGCCAAGTGCATGTAA 30765 Query 23337 AAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAG 23396 | | ||| || ||||| || || ||||||| ||||||| | || || || ||||| Sbjct 30766 CAATCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAG 30825 Query 23397 TTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTAT 23456 | ||||||| | ||| || ||| || ||| ||| ||| || || ||| || Sbjct 30826 CTCGACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGAT 30885 Query 23457 TTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAA--ACAATAAACATGCA 23514 | | |||| |||| | | | ||||| | | | ||| | ||||||| Sbjct 30886 TGCATGAATAGAGCCTTC--TGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCA 30943 Query 23515 AAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGC 23574 || ||||||||||| |||||||| | ||| || | ||||| ||||| | ||| ||| Sbjct 30944 AAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGC 31003 Query 23575 ATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCA-AATGATCCGGAAAAGAAAATACC 23633 || ||||||||||| || | ||||||||| | |||| ||||||||||| || || || || Sbjct 31004 ATCAATCCTCGTTTCTTCAGCCAAAATATAG-AGCAGAATGATCCGGAGAAAAAGATTCC 31062 Query 23634 CTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATA---ATCAGAAAT 23690 || || ||||||||||| || | | | |||| | |||| | ||| | Sbjct 31063 TTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCA--- 31119 Query 23691 CCAtttttttGTCCAATTAGCCTTCAATT--TTACACACTCAATTGTTTCAATTGCTTTT 23748 |||||| | ||| | || || ||| | || ||| ||||||||||| || | Sbjct 31120 CCATTTCAACGCCCATTGTGCTTT--ATTGGTAACGCACGGGATTGTTTCAATCGCGCAT 31177 Query 23749 AAGAGAAAAGTTTTTTCTTCATT--ATCTGTTATATATGTATCAATTAGTAAACTATACA 23806 | | || | | ||| | || |||| | || ||||||||||| | ||| ||||| Sbjct 31178 AGTA--AATGCTGTTTTTCGGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACA 31235 Query 23807 TTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACA 23866 ||| || || |||||||| || ||||| || || |||||||| |||| |||||| | | Sbjct 31236 CTTCCGAGTGTATATTTTCTATTGCAATTTGGAATCCATAAAAGCATCGAGCTTCCGGGA 31295 Query 23867 ATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAG 23926 |||||| ||| | || | | || | |||||| |||||||| |||||||| || | Sbjct 31296 TTTGAACCTCACTGCTGAAATTCATGGCGAGATTTTCATTAACAATCCCATCACTGGCTG 31355 Query 23927 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAAT 23986 ||||||| || | || | ||| ||||| ||||| |||| |||| || ||| | Sbjct 31356 CAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTCTCATTGTCCGATATATTAAGCCAGT 31415 Query 23987 CATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCT 24046 |||| || || | ||||| | ||| || | |||||||| |||||| || || Sbjct 31416 CATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCT 31475 Query 24047 TATACATTAGCCAAATATCATTATGTTGTATTGGAAATA 24085 ||||||| |||||| ||| |||||||| ||||||| Sbjct 31476 TATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATA 31514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521463587843000