Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq3502 114 2e-20 >seq3502 Length=87171 Score = 114 bits (126), Expect = 2e-20 Identities = 268/402 (67%), Gaps = 2/402 (0%) Strand=Plus/Plus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| ||||||||||| | ||||| ||||||||| | ||||| || || |||||| | Sbjct 14904 AAGGCGATTTAGGACCAATCTACGGCTTTCAATGGCGTCATTTCGGTGCAAGTTACACAG 14963 Query 50533 AT-TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACG 50591 || ||| | | ||||| || || ||| | |||||||| | | ||| | Sbjct 14964 ATATGC-ATGCGGATTACAGCGGCCAGGGCTTTGATCAACTCGCCGATGTGATACACAAA 15022 Query 50592 TTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATA 50651 | ||||| ||| | ||| ||||| | | |||| ||||||||||||||| || Sbjct 15023 CTCAAAACTGACCAAAATTGTCGACGTATCATCTTATCCGCTTGGAATCCAACCGATTTA 15082 Query 50652 GATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCACAGACAATGTT 50711 | ||| | |||||||| |||||| | | || |||||||| | || | | Sbjct 15083 GCCGAAATGGCATTACCTCCCTGTCATCTCATGTGCCAATTTTACGTTGCAAATGGGGAA 15142 Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771 ||||| || ||| || || |||| |||||||| ||| | |||||||| ||||| | Sbjct 15143 TTATCATGCCAAATGTACCAGCGATCCGCTGATATTGGTCTGGGCGTTCCATTCAATATT 15202 Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAA 50831 ||| ||||| | || || | |||| || || | ||| | |||| || || Sbjct 15203 GCTAGCTACGCGCTTTTGACAAAAATGATTGCACACGTGACTGATCTCCAACCCGGCGAG 15262 Query 50832 TTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCAC 50873 ||| ||||| | | ||||| || ||||| ||| | ||||| Sbjct 15263 TTTGTTCATGTGATCGGAGATGCCCATATCTACATGAATCAC 15304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667043972542200