Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306755.1_202015-10-05] 3,745 sequences; 32,921,669 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq25 111 1e-19 >seq25 Length=104834 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||||||| ||||| ||| ||||||||||| || || | Sbjct 77967 CCACCACGAAGACGAAGCACCAGATGAAGCGTAGACTCTTTCTGAATGTTGTAATCCGCA 78026 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || || || || ||||| || || || || || ||||| | ||| Sbjct 78027 AGCGTTCGTCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGA 78086 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | || |||||| ||| || |||| || | | | |||||| ||||| || Sbjct 78087 ATTCCTTCTTTGTCCTGGATCTTCGCCTTC-ACATTGTCAATAGTGTCAGATGACTCGAC 78145 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||||| ||||| || ||||||||||| || ||||| ||||| Sbjct 78146 TTCCAGAGTTATAGTTTTCCCGGTCAGCGTCTTAACAAAAATTTGCAT 78193 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||||| ||||| |||| ||| || ||||| ||||| || || | Sbjct 78195 CCACCACGAAGACGTAGCACCAAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCA 78254 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || || || || ||||| || || || || || ||||| | ||| Sbjct 78255 AGCGTTCGTCCGTCTTCCAGTTGTTTACCGGCAAAAATTAGACGTTGCTGGTCTGGAGGA 78314 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | || |||||| ||| || ||||| | | | | ||| || || ||||| Sbjct 78315 ATTCCTTCTTTGTCCTGGATCTTCGCCTTCA-CATTGTCGATAGTATCTGAAGATTCCAC 78373 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||| || ||||| || ||||||||||| || ||||| ||||| Sbjct 78374 TTCCAACGTAATAGTTTTCCCAGTCAGCGTCTTAACAAAAATTTGCAT 78421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462282358394000