Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1573 233 2e-56 >seq1573 Length=148509 Score = 233 bits (258), Expect = 2e-56 Identities = 583/873 (67%), Gaps = 22/873 (3%) Strand=Plus/Minus Query 16679 TAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATG 16738 || || | ||||||||| || |||||||| ||||| || | ||||| || | ||||| Sbjct 118822 TATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCATC 118763 Query 16739 AAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTA 16798 | ||||| ||||||| ||| | ||| || | || ||| | | |||| | Sbjct 118762 CAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGCCAAGTGCATGTAACAATCGA 118703 Query 16799 TCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC 16858 ||||| ||||| || || ||||| | ||| || | |||||||| || || || Sbjct 118702 TCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGACT 118643 Query 16859 GGAAGAGCTTC-CGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 ||||| | || ||| ||| || ||| || || | ||| || || ||| || | Sbjct 118642 GGAAGTGAATCTCGTACAAATTC-TTGTTCGATGATAACGGCGTCGGAAATGATTGCATG 118584 Query 16918 AACTCGTTCCTC--GGACGGTGTATGTTTAAGATGTTTAA--ACATCAGACATGCGAAAT 16973 || | | ||| ||| | | | |||| | || | ||||||||||||| || | Sbjct 118583 AA-TAGAGCCTTCTGGAAGCT---TATTTACCAGTTTCGAGTACATCAGACATGCAAAGT 118528 Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033 | ||||||| ||| || || | ||||| || || || ||||| | || |||||| Sbjct 118527 CACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCA 118468 Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093 |||||||||||| | ||||||||| | | ||| || || || || || || || |||| Sbjct 118467 ATCCTCGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGA 118408 Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGT-CTTTGTTACGAATCCATTTC 17152 ||| ||||| || | | || ||| || ||| || | ||||| || | ||||||| Sbjct 118407 CGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCA-CCATTTC 118349 Query 17153 TGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTC 17212 | |||| | ||||| | | | ||| || ||||| || || | ||| | | Sbjct 118348 AACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAGTAAATGC 118289 Query 17213 TCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGT 17272 | |||||| | | || | || || ||||| || | || |||| ||| |||||| Sbjct 118288 TGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGT 118229 Query 17273 ATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 || || || || || || |||||||||||||||||||| ||||| | || ||||| || Sbjct 118228 ATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCA 118169 Query 17333 ACGTAGAA--TCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACG 17390 | ||| || | || |||||||| || || || || || || || || || || | Sbjct 118168 CTGCTGAAATTCAT--GGCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAGAAGG 118111 Query 17391 CCAATATATGCTTAATGAAATATTTTTC---GTCCGGTGTAAGAACGCGCCAGTCCTTTA 17447 |||| | || || || || | | |||| ||||| | || || ||||||| || | Sbjct 118110 CCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATATTAA---GCCAGTCATTCA 118054 Query 17448 AATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACA 17507 || | | ||| | |||||| | ||||||||| || ||| |||| || ||||||| Sbjct 118053 TGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATACA 117994 Query 17508 TATTCCAAATATCATTGTATTGTATGGGGAATA 17540 | | |||||| ||| | |||||| || |||| Sbjct 117993 TGTCCCAAATCTCAGATTGTTGTATCGGAAATA 117961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517498639206120