Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq474 87.8 1e-12 >seq474 Length=30871 Score = 87.8 bits (96), Expect = 1e-12 Identities = 184/272 (68%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 97003 AGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTC-TGTGAGAGCATCAATGTGATT 97061 |||||||| || || | ||||| || ||| || | ||| || | || | |||||| Sbjct 10749 AGTGTTGGAAACGGGCGTGGAGTGCGTTCAAGTTGTGCCTGT-AGCGGTTCCAAGTGATT 10807 Query 97062 CACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGAC 97121 || || || || |||||||| | |||| ||| || || || | |||||| || Sbjct 10808 CATGTAGATATGGGCATCTCCGATCACATGAACAAACTCGCCGGGTTGGAGATCAGTCAC 10867 Query 97122 ATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCC 97181 || || ||||| || || || | ||||||||||| ||||| || || || || || Sbjct 10868 GTGTGCAATCATTTTTGTCAAAAGCGCGTAGCTAGCAATATTAAATGGAACGCCCAGACC 10927 Query 97182 CATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 |||||||| |||| || || | || || || | | |||| || ||||| || Sbjct 10928 AATATCAGCGGATCGCTGGTACATTTGGCATGATAATTCCCCATTTGCAACGTAAAATTG 10987 Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTT 97273 | || | ||||||||| || || ||||||| Sbjct 10988 GCACATCAGATGACAGGGAGGTAATGCCATTT 11019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346753320344630