Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq474 165 7e-36 >seq474 Length=30871 Score = 165 bits (182), Expect = 7e-36 Identities = 283/411 (69%), Gaps = 0/411 (0%) Strand=Plus/Minus Query 20214 AGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGT 20273 ||| || ||||| || || | || || ||||||||| | ||||| || || || Sbjct 11204 AGAAGGCGATTTAGGACCAATCTACGGCTTTCAATGGCGTCATTTCGGTGCAAGTTACAC 11145 Query 20274 TGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTT 20333 || ||| | | |||| ||| || || | |||||| | |||| || | Sbjct 11144 AGATATGCATGCGGATTACAGTGGCCAGGGCTTTGATCAACTCGCCGATGTGATACACAA 11085 Query 20334 AATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGT 20393 | | ||||| ||| ||| || | || || |||| ||| ||||| | | ||| | Sbjct 11084 ACTCAAAACTGACCAAAATTGTCGACGTATCATCTTATCCGCTTGGAATCCAACCGATTT 11025 Query 20394 GCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGA 20453 | |||||| || ||||| |||||| || | ||||||||||||||||| ||| || Sbjct 11024 AGCCGAAATGGCATTACCTCCCTGTCATCTGATGTGCCAATTTTACGTTGCAAATGGGGA 10965 Query 20454 ATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATAT 20513 ||| || || |||||||| || |||||||||||||| || ||||| ||||| || ||||| Sbjct 10964 ATTATCATGCCAAATGTACCAGCGATCCGCTGATATTGGTCTGGGCGTTCCATTTAATAT 10905 Query 20514 TGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGA 20573 ||| || || ||||| | || | ||||||||||| || || ||| | || | || || Sbjct 10904 TGCTAGCTACGCGCTTTTGACAAAAATGATTGCACACGTGACTGATCTCCAACCCGGCGA 10845 Query 20574 CTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACC 20624 || || || || ||||| || ||||| ||| | ||||| | ||||| Sbjct 10844 GTTTGTTCATGTGATCGGAGATGCCCATATCTACATGAATCACTTGGAACC 10794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399148684565755