Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3420 84.2 2e-11 >seq3420 Length=11708 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || ||||| || |||||||||||||| || || |||| |||| ||| Sbjct 277 ACCAGATGAAGCGTAGATTCTTTCTGAATGTTGTAATCCGCAAGCGTGCGACCGTCTTCC 218 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 |||||||| || ||||| |||| || || || || ||||| | || |||||||| | Sbjct 217 AGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCTTGA 158 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | ||| || |||| ||||| || || Sbjct 157 ATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAACTTCCAACGTAATAGTTTTC 98 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| ||||| |||||||| Sbjct 97 CCAGTTAGCGTCTTAACAAAAATTTGCAT 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395040248067439