Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1573 257 2e-63 >seq1573 Length=148509 Score = 257 bits (284), Expect = 2e-63 Identities = 523/762 (69%), Gaps = 31/762 (4%) Strand=Plus/Minus Query 13918 ATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCAT 13977 |||||| | ||| | ||| ||||| ||||| ||||| |||| ||| || || | ||||| Sbjct 118823 ATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCAT 118764 Query 13978 AAAATCAAATGGATTTGT----TGACATAAACACTTTATCACAACCTAGTTCTAATAGTA 14033 | ||||| ||||| | ||| |||| ||| | || || ||| | || | Sbjct 118763 CCAGTCAAAGGGATTAGAAGCGTGATATAA---CTTGCTGACG-CCAAGTGCATGTAACA 118708 Query 14034 ATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTT 14093 ||| |||||| | ||||| || |||||| ||| ||| ||||||| || ||||| | Sbjct 118707 ATCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCT 118648 Query 14094 TTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAA 14153 || |||| | || || |||||||| ||| || || || ||| ||| | Sbjct 118647 CGACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGA---AATGA 118591 Query 14154 TCGTAATAATTT--CATTAGAAGGAGGATATTTTAGATGTTTAAAA---ATTAAACACGC 14208 | | | ||| | || ||| | | |||| |||| | || | ||| || Sbjct 118590 TTGCATGAATAGAGCCTTCT--GGAAGCTTATTTACCAGTTTCGAGTACATCAGACATGC 118533 Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268 ||| |||||||| || || ||||| | ||| || || || |||||||| | ||| || Sbjct 118532 AAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGG 118473 Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGC-GAATGATCCGGAAAAGAATATTC 14327 ||||||||||||||| || | ||||||||| | ||| |||||||||||| || || |||| Sbjct 118472 CATCAATCCTCGTTTCTTCAGCCAAAATATAG-AGCAGAATGATCCGGAGAAAAAGATTC 118414 Query 14328 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT--TTTTGTTCGATAT 14385 | || || || ||||| |||| | || |||| ||||||| || | ||| | ||| Sbjct 118413 CTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCG--CA 118356 Query 14386 CCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAA 14445 |||||| ||||||| | ||| || ||| | ||||||||||| || | Sbjct 118355 CCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCGCACAG 118296 Query 14446 TAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14505 |||||| | || || | | | | |||||||||||||| | ||| ||||| ||| Sbjct 118295 TAAATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTC 118236 Query 14506 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14565 |||||||| ||||| || || || ||||| || ||||| |||| |||||| | || Sbjct 118235 CGAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTG 118176 Query 14566 TACCT--CTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCA 14623 |||| ||| ||| || | ||| | ||||||||| || || |||||||| |||||| Sbjct 118175 AACCTCACTGCTGAAATTCAT--GGCGAGATTTTCATTGACAATTCCATCACTGGCTGCA 118118 Query 14624 AAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG 14665 || || ||||| | || ||| ||||||| | || ||||||| Sbjct 118117 AAGAAGGCCAACACGTGTTTGATAAAGTGT--CT-TTCATTG 118079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482301833166120