Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1573 109 4e-19 >seq1573 Length=148509 Score = 109 bits (120), Expect = 4e-19 Identities = 285/419 (68%), Gaps = 18/419 (4%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGCCATATTCTGGCT 22808 ||||||||||| || ||||| || | || || || ||||| ||| | ||||| ||||| Sbjct 118395 GCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGC-TCTATATTTTGGCT 118453 Query 22809 GAAGAAACGTTCGCTCATGCCAGG-GTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||||| | ||||| || || || ||||| || ||| | || || ||||| | Sbjct 118454 GAAGAAACGAGGATTGATGCCTGGACTTTGC-TTTTCAAATGAGCTCATCAGTCGTGATG 118512 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC 22927 |||| ||||| ||||||||||| ||| || ||| | || ||| ||| || | | | Sbjct 118513 AAGGACTACATTGTGACTTTGCATGTCTGATGTACTCGAAACTGGTAAATAAGC--TTCC 118570 Query 22928 AGGACGATGCA--CATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCA 22985 || | | | | ||| |||||| || || |||||| ||| || | || | | Sbjct 118571 AGAAGGCTCTATTCATGCAATCATTTCCGACGCCGTTATCATCGAACAAGAATTTGTACG 118630 Query 22986 AGAGGCAC-TAAAGACACCCCTACTTGGTATGAATAGTGACAGT---ATGAGACTGTACA 23041 ||| ||| | || | ||| |||| |||||| | | ||| ||| | | |||| Sbjct 118631 AGATTCACTTCCAGTC-GAGCTAATTGGAATGAAT--TCA-AGTTTGATGGGTCAATACA 118686 Query 23042 TACAGTTTGTTGCAGATCGCCTGCTCGATGC-CCTGGGTTATGCAAAGATGTATAACGTT 23100 | ||||||| || ||||| || | |||| | ||| | || ||| | ||| ||| | Sbjct 118687 TCGAGTTTGTGGCGGATCGATTGTTACATGCACTTGGCGTCAGC-AAGTTATATCACGCT 118745 Query 23101 GCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159 | ||||| ||||| | ||||||| ||| | |||| ||||||||||| ||||| Sbjct 118746 TCTAATCCCTTTGACTGGATGGATATGATTTCTCTGCAAGGAAAAACAAACTTTTTTGA 118804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356202084347377