Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2330 105 7e-18 seq3420 104 2e-17 >seq2330 Length=206 Score = 105 bits (116), Expect = 7e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 139559 AAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGC 139618 ||||| | ||| || ||||| || ||||| ||||| | || | |||||| || Sbjct 1 AAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTACGTCCGTCTTCTAGT 60 Query 139619 TGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATT 139678 ||||||||||| ||||||||||||||||||| ||||| || ||||||||||| ||| | Sbjct 61 TGTTTACCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTC-TTGAAT 119 Query 139679 TTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCC 139737 || | |||| | || | ||||||| | ||| || || | || | ||||| || Sbjct 120 CTTGGCCTTTACATTATCGATCGTGTCGGAAGACTCAACTTCCAAAGTGATGGTCTTTCC 179 Query 139738 GGTCAACGTTTTTACGAATATTTGCAT 139764 || | |||||| || || || ||||| Sbjct 180 AGTAAGCGTTTTCACAAAAATCTGCAT 206 >seq3420 Length=11708 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| |||||| ||||| |||||||| ||||| | |||| |||||| || ||| Sbjct 271 TGAAGCGTAGATTCTTTCTGAATGTTGTAATCCGCAAGCGTGCGACCGTCTTCCAGTTGT 212 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 |||||||| ||||||||||||||||||| ||||| || ||||| ||||| ||| | || Sbjct 211 TTACCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTC-TTGAATCTT 153 Query 139682 TG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | |||| | || | ||||| | | ||| || || | || | || || || || Sbjct 152 GGCCTTTACATTATCGATCGTGTCTGAAGACTCAACTTCCAACGTAATAGTTTTCCCAGT 93 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | ||| || || || |||||||| Sbjct 92 TAGCGTCTTAACAAAAATTTGCAT 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496018988392800