Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3420 100 3e-16 seq2330 82.4 7e-11 >seq3420 Length=11708 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| || || ||||||| ||| | || || | ||| | || || Sbjct 68 AATGCAAATTTTTGTTAAGACGCTAACTGGGAAAACTATTACGTTGGAAGTTGAGTCTTC 127 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| ||||| | || || |||||| ||||| ||||| || ||||| ||||| Sbjct 128 AGACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGATCA 187 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG-ACTATA 26946 ||| | || || | || || |||||||| ||||| | | | | || ||| | || | Sbjct 188 GCAACGTCTGATCTTCGCTGGTAAACAACTGGAAGACGGTCGCA-CGCTTGCGGATTACA 246 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||| ||||||||||| | |||||||| || Sbjct 247 ACATTCAGAAAGAATCTACGCTTCATCTGGTGCT 280 >seq2330 Length=206 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | |||||||| | ||||| | ||| | || || | Sbjct 206 ATGCAGATTTTTGTGAAAACGCTTACTGGAAAGACCATCACTTTGGAAGTTGAGTCTTCC 147 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || |||||| ||||||||||| || ||||| ||||| Sbjct 146 GACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 87 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGA 26923 ||| | || || | || || |||||||| ||||| Sbjct 86 CAACGTCTGATCTTCGCTGGTAAACAACTAGAAGA 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478618967370480