Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3420 100 2e-16 seq2330 84.2 2e-11 >seq3420 Length=11708 Score = 100 bits (110), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || ||||||| ||| | ||||| | ||||| ||| | Sbjct 68 AATGCAAATTTTTGTTAAGACGCTAACTGGGAAAACTATTACGTTGGAAGTTGAGTCTTC 127 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| ||||| | || || |||||| ||||| ||||| || ||||| ||||| Sbjct 128 AGACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGATCA 187 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG-ATTATA 24168 || | ||||| | || || || ||||| ||||| | | | || ||| |||| | Sbjct 188 GCAACGTCTGATCTTCGCTGGTAAACAACTGGAAGACGGTCGCA-CGCTTGCGGATTACA 246 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||||| ||||||||||| ||||| | ||| Sbjct 247 ACATTCAGAAAGAATCTACGCTTCATCTGGTG 278 >seq2330 Length=206 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | |||||||| | || || | ||||| ||| | | Sbjct 206 ATGCAGATTTTTGTGAAAACGCTTACTGGAAAGACCATCACTTTGGAAGTTGAGTCTTCC 147 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| ||||||||||| || ||||| ||||| Sbjct 146 GACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 87 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGAAACGTCAGCGATTATAA 24169 || | ||||| | || || || ||||| ||||| ||| | | | | ||||| || Sbjct 86 CAACGTCTGATCTTCGCTGGTAAACAACTAGAAGACGGACGTACTCTTGCG-GATTACAA 28 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| || |||||||| || Sbjct 27 CATCCAGAAAGAATCAAC 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429897963965145