Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1573 260 2e-64 seq534 217 2e-51 >seq1573 Length=148509 Score = 260 bits (288), Expect = 2e-64 Identities = 439/626 (70%), Gaps = 11/626 (2%) Strand=Plus/Minus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 |||||| |||||| || || || ||||| || || || | ||| || | || || |||| Sbjct 118545 ACATCAGACATGCAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAA 118486 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 | ||||| ||||| | || || || || ||||||||||| || ||| |||||||| Sbjct 118485 AGCAAAGTCCAGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCG 118427 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 || || || |||||||| || ||||||||||| | | ||| ||| || | ||| Sbjct 118426 GAGAAAAAGATTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATAC 118367 Query 32832 TCATGTATC-CACT-TTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 32887 | || ||| ||| ||| | ||||| | || || || | || || || ||||| || Sbjct 118366 TT-TGGATCGCACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTC 118308 Query 32888 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 32947 || || | | || | ||||||| | |||||| | |||||||||||||| | Sbjct 118307 AATCGCGCACAGTAAATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAA 118248 Query 32948 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGC 33007 ||||| |||||| || || ||||| || || |||||||||||||| ||||||| ||| Sbjct 118247 CGAATACACTTCCGAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGC 118188 Query 33008 CTCGGTAATCTGTACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCG 33065 |||| ||||| || || | | ||| || | || | ||||||||| || ||||| Sbjct 118187 TTCGGGGATCTGAACCTCACTGCTGAAATTCATG--GCGAGATTTTCATTGACAATTCCA 118130 Query 33066 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT 33125 |||||||||||||| || ||||| || ||||| ||||| | | |||| | | || Sbjct 118129 TCACTGGCTGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATA 118070 Query 33126 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 33185 ||| ||| ||||| || || | | ||| | |||||| | |||||||| |||| Sbjct 118069 TTAAGCCAGTCATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCC 118010 Query 33186 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTA 33245 ||||| || |||||||| | ||| || ||| | ||| || ||||| | ||||| | Sbjct 118009 TCTGCTTTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGG 117950 Query 33246 TTTGGATTTTTTGCAAGGATTGGTTC 33271 || ||||||| | ||| | ||||| Sbjct 117949 TTCGGATTTTCTCGAAGAAAAGGTTC 117924 >seq534 Length=9540 Score = 217 bits (240), Expect = 2e-51 Identities = 1401/2241 (63%), Gaps = 38/2241 (2%) Strand=Plus/Plus Query 61880 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 61939 || || |||||||||||||| || || ||||| ||||| |||| |||||||| Sbjct 3971 GTTCGGAGATAGTACATTCCTGTCTTGAGACCTTTTTTCCATGCGTAGAAATGCATCGAA 4030 Query 61940 GTTAGTTTGGAATAAC--TCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGA 61997 || ||||| | | || |||| || || || || ||||| | |||||||| ||| | Sbjct 4031 GTGAGTTT--ACTGACAGTCGGGTCGGCAATGTGAATATTTAGTGATTGACTCTGACAAA 4088 Query 61998 TGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAG 62057 || | ||||| | || |||||||| | | ||||| |||||| |||||||||| | Sbjct 4089 TGTACGCTCCTCGATCGGCAGCCATGTCCAAAATCGCCTTTTGCTTGATTTCCCAAACTG 4148 Query 62058 TTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCAT 62114 |||| || | || | || |||| | | |||| || | ||| || | || Sbjct 4149 TTTTGTACTTTTCTTTCACATGAGGCGGAATTTCAGCGATATTTTGTACGGAACCGCGAT 4208 Query 62115 CTGCCATAATCCTATTCTTGATCTCATCAT-TCCATAATTTTCTCTCGGTTAAAACTCTA 62173 | | || |||| | || | || |||| || || |||| | || |||| Sbjct 4209 CGCGAAGGATTTGATTCCGAACGTC-TGATGTCCACAAATTCATCTCAAT--AAGCTCTT 4265 Query 62174 --AGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATAT 62231 | ||||| || || | | ||||||||||| | || | ||| || | || | Sbjct 4266 CCATGAGATATTTGTTGACAATTGTAAATTCTCCAGCGAGGACGCGTCGATTGAACATGT 4325 Query 62232 TACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCG 62291 | || |||| || | |||||| ||| || | ||||||||| ||||| || || | Sbjct 4326 TGGAAGTGAACGGCTCGATAGACTCGCAATTGCCGAGAATTTGAGCCGTTGAGGCGGTTG 4385 Query 62292 GCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAG 62351 |||| || || | || ||| |||| | |||| || | || ||||| | Sbjct 4386 GCATCGGAGCGAGCAGCAAAGAGTTTCGGATTCCGTGAGTAGCTACTTGCTCTTTCAACT 4445 Query 62352 GTTCCCAATTCCAAAGATCCGAC---GGTACAACNNNNNNNNNNNNNNNTTGTAGAATAC 62408 | | ||||| ||| || | || || | || ||| | |||| Sbjct 4446 GCTTCCAATCCCATCGACCGGAATCGGGAATGACCTGCCACATATCAAATTGAAAGATAC 4505 Query 62409 CGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCAC 62468 | ||| | ||||| |||| | ||||| ||||| | | || | ||| Sbjct 4506 CTCGACTAACTGGTGATCCAGCATAGCTCTCGTACGGTCCGAGTTCCCGTGCCAATTCCA 4565 Query 62469 AACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCG 62528 || || | || || |||| || ||||| || || | || || || || | | Sbjct 4566 TGGAAGCTTCCATCGCCGCGAAATACATCGTTTCAAAAATTTCTTTGTTGAGCTCGCGAG 4625 Query 62529 CTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACAC 62588 | | ||| ||||||||| | | | || | ||||| || || | |||||||| | Sbjct 4626 CAGCTTTGCTTTCAAATGGAAGACTCATCAGTAAAAACGTATCGGCAAGACCTTGAACGC 4685 Query 62589 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAAT 62648 | || || || |||| ||||| || ||| | || ||||| ||||| |||||||||| Sbjct 4686 CGATTCCAATCGGTCGATGTCGCTGATTGCTCACTTGTGCTTCAGGAATCGGATAATAAT 4745 Query 62649 TAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGA 62708 | | ||| || ||||| ||||||||| | || | ||| | || | | ||| Sbjct 4746 TGAGATCAATGATTTTGTTGAGATTTTTCGTAACGATTTTTGTGATTTCGTATAATTTTG 4805 Query 62709 GAAAATCAAATCGCCCATCTATTACAAACATGTT--CAATGCAACAGATGCCAGATTACA 62766 ||| | |||| | ||| |||| | || || |||||| | || |||| ||| || Sbjct 4806 CAAATTGAAATT--CTTTCTGATACACAAATTTTGACAATGCGATGGAAGCCAAATTGCA 4863 Query 62767 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 62826 || || || || || | || | || | || || ||| ||| ||||| || | Sbjct 4864 TACTGCCACTTCTTTGGAGTCTGAGTACTCGATGATTTCACAGCAGAGATTGCTTGATCG 4923 Query 62827 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 62886 |||||||| | ||| || ||||| || ||||| || || || ||||| || | Sbjct 4924 AATGGTTCCAAGATTCTGCTGATTGGATTTACGATTACAAGCGTCTTTGTAAAGCATATA 4983 Query 62887 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT-CGAGCCTTTA 62945 || || || || ||||||||| || | ||| || ||| | | | | | |||| Sbjct 4984 CGGCGTTCCGGTCTCAATCTGACTATCCAAAATGGCAAACCACA--ATTGCTGGGCTTTG 5041 Query 62946 TTATAGATTT---GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGT 63002 | || || | | |||| ||||| | |||| || || || ||| Sbjct 5042 --ACAGTCTTTCGGGCAATGTTTTGAGACTCGTACTTTTTATATAACGCATCAAATTCGC 5099 Query 63003 CTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63062 |||||| | | |||| ||| || | |||||| | || ||| ||| || Sbjct 5100 TTCCCCATGTCTCATAAAGTCGTGGAGCCTCGTTCGGACAGAATAAACTCCATTCTTGGT 5159 Query 63063 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG 63122 || | ||| ||||||||||| ||||| || ||||||||||| ||| | ||||| | Sbjct 5160 TGTCTTCCACACGTTTCATAAACAGATCGGGGATCCAAAGAGCATAAAACAAATCTCGAG 5219 Query 63123 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63182 || ||| || ||||| |||||| || || || ||| | | ||||| | | Sbjct 5220 CTCGATGGAGTTCATTTCCATGATTCTTACGTAGTTCCAGAAACTCAAAGATATCCGCGT 5279 Query 63183 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63242 |||| || || | || || || | | || ||| || || || ||||| | || Sbjct 5280 GCCAGGGCTCTAGATAAATTGCAAAAGACCCTTTCCGCTTCCCACCGCCTTGATCAACGT 5339 Query 63243 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 63302 ||| ||| |||| ||| | || | | |||||||| ||| ||||| || | ||||| | Sbjct 5340 ATCGAGCTGTGTCATTGAACACCCGAAGCATTGGAACAATTCCATTCGAACTTCCATTCG 5399 Query 63303 TCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63362 |||| ||||| || ||| |||||||| ||| | || || || || | Sbjct 5400 TCCCGCGAATATAACTGTTGGTGGAGCGAATATTGGAAATACTGACGCCAATACCGCCAG 5459 Query 63363 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 63422 || || || || | || ||| |||| | ||| || || ||||| || ||| ||||| Sbjct 5460 CCCACTTTGAAATACACGCACATTGTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCAT 5519 Query 63423 CCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 63482 | |||| | ||||||||| || | |||| | ||| ||||||||||| || | Sbjct 5520 CTTGCATGGATAATAGAAAACACGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAA 5579 Query 63483 AGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 63542 || |||| || || ||||| | |||| || | | | ||||| || | | | | Sbjct 5580 GCGTCGGAGTTGCATGCGTAAAGAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGG 5639 Query 63543 AGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTT 63602 ||| | || | || || || || || || || ||||||| ||| || || || | || Sbjct 5640 CGTCCAAATTCTCTTTGTGTATGCCGACAGCCACTCGCATTATCATATGTTGTGGGCGTT 5699 Query 63603 CAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 63662 || | || || | ||||| || ||||| |||| ||||||||| ||||||| Sbjct 5700 CACACACTTTTCCATTCACACGCAACAGATACGATTTCTCCAGAGTTTTAAAGCCAAAAT 5759 Query 63663 AGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGT 63722 ||| ||| |||||||| || ||||| | || ||||| || || | | Sbjct 5760 AGTCGTAATCAAAGTCTCTATCACCGATAATTGCGGAATTGAGAGCTTCTTTGTTCTCCA 5819 Query 63723 TAACTACATCCATGGTAATACTTG--AAATAATAGGAAAATG---TTTCCCATTTTTAGG 63777 |||| | || ||| || ||| | |||| ||| | ||| ||| | Sbjct 5820 TAAC-AATTCGATGCACATCGTTGGCGATTAAT-GGAGCGGGTACTTTGGTGGTTTCGTG 5877 Query 63778 ATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 63837 || | || ||||| | || |||||| || | ||| ||||| | ||| || Sbjct 5878 CTTATTTTCGTAAAATAA---TTGAATGTTTTCACTGAAGACTTTGTTTGTATTTTTATG 5934 Query 63838 TAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACA 63897 || ||| || | || |||| ||| || | ||| |||| ||||||||||| | || Sbjct 5935 TAAATTGGAAATAGCAATTCGAGCAGCCAATTTGGAGAAATCGGGATGTTGTGTGCTGCA 5994 Query 63898 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATAT 63957 ||||| |||| ||||||| ||||||||| || || || || ||| | Sbjct 5995 GTAAGCTGCGGTTTCTGCTGCCAATTCGTCCAATTCCGATGTGGTGACGCCCGGATACAC 6054 Query 63958 TCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATA 64017 || || || ||| || ||||| | ||||| | | || ||||||||| || Sbjct 6055 GCCAGCAATCACTTTCTGAGATATTTGGACGGGATCAACGTATTCTGTGTTTAAGTTGTA 6114 Query 64018 ACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATT 64077 || | |||| | || || | |||||||| || || |||| ||| || ||| | Sbjct 6115 GCAGAGTTTTGTGATTCGCGCAGTGATTTTGTCGAATTTGACGACTTCTTTTCGTCCGTC 6174 Query 64078 TCGTTTAATGACAAACATTTT 64098 ||||| |||||| ||||||| Sbjct 6175 ACGTTTGATGACATACATTTT 6195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633574505816400