Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1573 242 4e-59 >seq1573 Length=148509 Score = 242 bits (268), Expect = 4e-59 Identities = 646/966 (67%), Gaps = 31/966 (3%) Strand=Plus/Minus Query 92741 ATTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCAT-AACACCA 92799 |||||||||||||||||| || || || | || || | | || ||||||| Sbjct 118887 ATTAGAAATCTGCATCTAAAGTGAAAACTTGCTCCTTTGCAG----AGACACCAACACCA 118832 Query 92800 CATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATC 92859 |||| ||||| ||||| ||| ||||| || ||||| ||||||| || ||| ||| Sbjct 118831 GATTTCGCATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATC 118772 Query 92860 GAATTCA-CTAGTGATTGG-ATTCTTGGCGTTATAATACTTTTCACCGATCAACT-CGTA 92916 || || | ||| | || ||| |||| ||| |||| || ||| | | | Sbjct 118771 ATATCCATCCAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTGACGC-CAAGTGCATG 118713 Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976 || |||| ||| || ||||| || ||||| ||| ||||||| |||||||||| | Sbjct 118712 TAACAATCGATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAAT 118653 Query 92977 AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAA 93036 || || || || | || | || |||| ||||| | |||||| || | Sbjct 118652 TAGCTCGACTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAAT 118593 Query 93037 GATTTCTATTACTCTACTATT-TGGTGGTTTTTGTACGACATAATTGTACATTAAGCACG 93095 |||| | || | | | || ||| | || | ||| | | |||||| | || | Sbjct 118592 GATTGC-ATGAATAGAGCCTTCTGGAAGCTTATTTACCAGTTTCGAGTACATCAGACATG 118534 Query 93096 CAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA--CC 93153 ||||||| ||||| ||||| || || || | |||||| |||| ||| || Sbjct 118533 CAAAGTCACAATGTAGTCCTTCATCACGACTGATGAGCTCATT--TGAAAAGCAAAGTCC 118476 Query 93154 TGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA-CCAGaaaaaaaTA 93212 || | || |||||||||||| ||||||||||| || ||| || | || || ||||| | Sbjct 118475 AGGCATCAATCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGA 118417 Query 93213 TACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGA 93272 | ||||| ||||| ||||| || || | | ||| ||||| | || || ||| || Sbjct 118416 TTCCTTCGACGGCCGCAAAGGCTACCACTCTTTCTGCAAAC---GAGGCAT-ACTTTGGA 118361 Query 93273 TC----CATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 || ||||| || ||||| | ||||| || ||| || || | |||||| || ||| Sbjct 118360 TCGCACCATTTCAACGCCCATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG 118301 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 | || | | | || | |||| ||||||||||| || || | |||||| Sbjct 118300 CACAGTAAATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATAC 118241 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 | ||| || || | ||| || ||||||||||| |||||||| || |||| |||||| | | Sbjct 118240 ACTTCCGAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGG 118181 Query 93449 ATCTGCACTTC-TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 ||||| || || || |||| || |||||||||||||||| || ||||| || Sbjct 118180 ATCTGAACCTCACTGCTGAAAT-TCATGGCGAGATTTTCATTGACAATTCCATCACTGGC 118122 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCA 93567 |||||| || ||||| | || || ||||| ||| | |||| || | ||| ||| Sbjct 118121 TGCAAAGAAGGCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATATTAAGCCA 118062 Query 93568 ATCGGATAGATCTTTTGAA--AGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || || || | || | | ||||| |||||| | |||||||| ||| |||||| Sbjct 118061 GTC--ATTCATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCT 118004 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGG 93685 || || ||||| ||||| || || | ||| || ||||||| |||||| || || || Sbjct 118003 TTCTTATACATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAAGCGGTTCGGA 117944 Query 93686 TTATCT 93691 || ||| Sbjct 117943 TTTTCT 117938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556810271843160