Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1573 120 6e-22 >seq1573 Length=148509 Score = 120 bits (132), Expect = 6e-22 Identities = 307/465 (66%), Gaps = 18/465 (4%) Strand=Plus/Plus Query 42412 TCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCA 42471 ||||| || | |||||||||| || ||| ||| || || |||||||| || || |||| Sbjct 118096 TCAAACACGTGTTGGCCTTCTTTGCAGCCAGTGATGGAATTGTCAATGAAAATCTCGCCA 118155 Query 42472 CCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAG 42531 | |||| | ||||| ||| | || || || ||||| ||||| || || || | Sbjct 118156 TGAATTTCAGCAGTGAGGTTCAGATCCCCGAAGCTCGATGCTTTTACGGATTTCAAATTG 118215 Query 42532 CCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATC 42591 | ||||| || | ||||| || ||||| | | || | | || |||||| |||| Sbjct 118216 CAATAGAAAATATACACTCGGAAGTGTATTCGTTATTGATTGATACATACATCAAAGATC 118275 Query 42592 CCGTCGAGCGTAACGGG-----CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAA 42646 | || ||| | |||| | || || || || || || ||| | | || Sbjct 118276 CAACTGAAA--AACAGCATTTACTGTGC---GCGATTGAAACAATCCCGTGCGTTACCAA 118330 Query 42647 GAAGGCGGACTGGGCGCTCAACTGG----ATCGAGAGTCCCGACGCAACGTTCGGCGAGA 42702 || || | |||||| | || ||| ||| | ||| | || |||| | || | Sbjct 118331 TAAAGCACAATGGGCGTTGAAATGGTGCGATCCAAAGT----ATGCCTCGTTTGCAGAAA 118386 Query 42703 GGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCT 42762 | ||||||||||| | |||||||| || ||||| ||||| || | ||| ||| || | Sbjct 118387 GAGTGGTAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGCTCTATAT 118446 Query 42763 TCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822 | ||||| ||| | | | |||||| ||||| ||| || || || |||||||| Sbjct 118447 TTTGGCTGAAGAAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATCAGTC 118506 Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGA 42867 | || || || || ||| | |||||||| || || ||| ||||| Sbjct 118507 GTGATGAAGGACTACATTGTGACTTTGCATGTCTGATGTACTCGA 118551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944253513021840