Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq474 118 9e-22 >seq474 Length=30871 Score = 118 bits (130), Expect = 9e-22 Identities = 184/263 (70%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAG 20194 ||||| || ||||||||||| || || | |||| || || | || | ||||| Sbjct 10755 GGAAACGGGCGTGGAGTGCGTTCAAGTTGTGCCTGTAGCGGTTCCAAGTGATTCATGTAG 10814 Query 20195 ATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCA 20254 || ||||||||||| | | |||| |||||| |||||| ||| |||| || || ||| Sbjct 10815 ATATGGGCATCTCCGATCACATGAACAAACTCGCCGGGTTGGAGATCAGTCACGTGTGCA 10874 Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314 | ||| | || || || | ||||| ||||| ||||| ||||| |||| ||| || || Sbjct 10875 ATCATTTTTGTCAAAAGCGCGTAGCTAGCAATATTAAATGGAACGCCCAGACCAATATCA 10934 Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAAC 20374 | || | ||| |||| || || || | || || | || || |||||||| || | | Sbjct 10935 GCGGATCGCTGGTACATTTGGCATGATAATTCCCCATTTGCAACGTAAAATTGGCACATC 10994 Query 20375 AAGTGACAGGGCGGAAGCGCCAT 20397 | |||||||| || | ||||| Sbjct 10995 AGATGACAGGGAGGTAATGCCAT 11017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441332750935560