Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq534 127 2e-24 seq1573 120 4e-22 >seq534 Length=9540 Score = 127 bits (140), Expect = 2e-24 Identities = 383/580 (66%), Gaps = 15/580 (3%) Strand=Plus/Plus Query 114694 CTCGTACTTTGTGTAGAGGGCTTCAAACTC--TTCACCCACGGCCTCTGAGAGCCCTGGT 114751 |||||||||| | || | || ||||| || ||| |||| | | || | || | ||| Sbjct 5068 CTCGTACTTTTTATATAACGCATCAAATTCGCTTC-CCCATGTC-TCATAAAGTCGTGGA 5125 Query 114752 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGG 114811 |||| | || ||||| | | ||||| || || ||||| ||||| || || Sbjct 5126 GCCTCGTTCGGACAGAATAAACTCCATTCTTGGTTGTCTTCCACACGTTTCATAAACAGA 5185 Query 114812 TCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 114871 || |||||||| ||||| | || | ||| ||| ||| ||||| || ||||| Sbjct 5186 TCGGGGATCCAAAGAGCATAAAACAAATCTCGAGCTCGATGGAGTTCATTTCCATGATTC 5245 Query 114872 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 114931 ||| | |||| ||| || | ||||||||||||||| || || || || | || | Sbjct 5246 TTACGTAGTTCCAGAAACTCAAAGATATCCGCGTGCCAGGGCTCTAGATAAATTGCAAAA 5305 Query 114932 GACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGA 114988 ||||| || || | ||| | || | || || | |||||| |||| || || ||| Sbjct 5306 GACCCTTTCCGCTTCCCACCGCCTTGATCAACGTATCGAGCTGTGTCATTGAACACCCGA 5365 Query 114989 AGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCT 115048 |||||||||| || |||| || ||||| ||||| |||||| | || ||| Sbjct 5366 AGCATTGGAACAATTCCATTCGAACTTCCATTCGTCCCGCGAATATAACTGTTGGTGGAG 5425 Query 115049 CTGACATCATGGATGTGC--ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACT 115106 | || || |||| | | | |||||||| || ||||||||||| || ||| || | Sbjct 5426 C-GA-ATATTGGAAATACTGACGCCAATACCGCCAGCCCACTTTGAAATACACGCACATT 5483 Query 115107 CCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATA--AGGAAGCA 115164 | || || |||| || |||||||| || ||| ||| || |||| || || || Sbjct 5484 GTTTCAGCGTGTCGTAAATGCCGTCGATAGAATCA-TCTTGCATG-GATAATAGAAAACA 5541 Query 115165 GCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 ||| | ||| || | || || || || ||||| || || || || || || | || Sbjct 5542 CGACGATAATTGGGGTCGAGGCGTTCCCGCATTGAAAAGCGTCGGAGTTGCATGCGTAAA 5601 Query 115225 CATACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCG 115264 | ||| ||||| | || || || ||||| |||||| Sbjct 5602 GAACTTTTGTGACATGTGTTCATACGTTTCCAAAACGGCG 5641 >seq1573 Length=148509 Score = 120 bits (132), Expect = 4e-22 Identities = 268/398 (67%), Gaps = 6/398 (2%) Strand=Plus/Minus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || || || || ||||| |||||| ||||| || ||||| ||||| ||||| | || Sbjct 118522 TGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAATCCT 118463 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 || ||||||| ||| || || | || ||||| || ||||| |||||||| || || | Sbjct 118462 CGTTTCTTCAGCCAAAATATAGAGCAGAATGATCCGGAGAAAAAGATTCCTTCGACGGCC 118403 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCC 126238 || || || | | | || ||||| ||| |||||| || |||| |||| |||| Sbjct 118402 GCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCACCATTTCAACGCC 118343 Query 126239 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG-AGTTCCTTCTT 126297 || || || || || | ||||||| || | ||||| || || | | || || Sbjct 118342 CATTGTGCTTTATTGGTAACGCACGGGATTGTTTCAATCGCG-CACAGTAAATGCTGTTT 118284 Query 126298 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT 126357 ||| | ||||||||||||||| |||| || | | ||||| ||| ||| | | Sbjct 118283 TTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCCGAGTGTATATT 118224 Query 126358 TTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 126415 ||| ||| ||| ||| | |||| || | || |||||| ||||| |||||| | Sbjct 118223 TTC--TATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGAACCTCACTG 118166 Query 126416 GCAAAATTGTTATTGATATTCTCAAAAACAATTCCATC 126453 ||||| | || ||| ||| ||||||||||| Sbjct 118165 CTGAAATTCATGGCGAGATTTTCATTGACAATTCCATC 118128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597299397627720