Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2330 100 3e-16 seq3420 86.0 6e-12 >seq2330 Length=206 Score = 100 bits (110), Expect = 3e-16 Identities = 142/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| || || || |||||||| || | |||||| ||| || ||||||||||| | Sbjct 11 TTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTACGTCCGTCTTCTAGTTGTTTACCAG 70 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTT 138537 |||| ||||| || || || ||||| || ||||||||||| ||| | || | ||| Sbjct 71 CGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTC-TTGAATCTTGGCCTTT 129 Query 138538 AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | || | ||||||| ||||| || || | || | || || ||||| || ||| Sbjct 130 ACATTATCGATCGTGTCGGAAGACTCAACTTCCAAAGTGATGGTCTTTCCAGTAAGCGTT 189 Query 138598 TTTACAAAAATCTGCAT 138614 || |||||||||||||| Sbjct 190 TTCACAAAAATCTGCAT 206 >seq3420 Length=11708 Score = 86.0 bits (94), Expect = 6e-12 Identities = 141/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA--GTCCTCGAGTTGTTTACCGG 138478 || || || ||||||||||| || | || || |||| ||| || ||||||||||| | Sbjct 262 GATTCTTTCTGAATGTTGTAATC-CGCA-AGCGTGCGACCGTCTTCCAGTTGTTTACCAG 205 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTT 138537 |||| ||||| || || || ||||| || ||||| ||||| ||| | || | ||| Sbjct 204 CGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTC-TTGAATCTTGGCCTTT 146 Query 138538 AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | || | ||||| | ||||| || || | ||| | ||||| ||||| || || Sbjct 145 ACATTATCGATCGTGTCTGAAGACTCAACTTCCAACGTAATAGTTTTCCCAGTTAGCGTC 86 Query 138598 TTTACAAAAATCTGCAT 138614 || |||||||| ||||| Sbjct 85 TTAACAAAAATTTGCAT 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496217370390480