Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2330 93.3 4e-14 seq2230 86.0 6e-12 >seq2330 Length=206 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 126908 AAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGC 126967 || || | ||| || ||||| || || |||||||| | | || || || ||||| Sbjct 1 AAGTGCAACGTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTACGTCCGTCTTCTAGT 60 Query 126968 TGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATT 127027 ||||| |||||| |||||| || |||||||| ||||| || || || ||||| || Sbjct 61 TGTTTACCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATC 120 Query 127028 TTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCG 127087 || ||| | | |||| ||||| | | ||| ||||| | || | || || || Sbjct 121 TTGGCCTTTACATTATCGATCGTGTCGGAAGACTCAACTTCCAAAGTGATGGTCTTTCCA 180 Query 127088 GTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| |||||||||||||| Sbjct 181 GTAAGCGTTTTCACAAAAATCTGCAT 206 >seq2230 Length=15872 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983 ||||||| || |||||||| | | ||| || || || | |||||||| ||| | | Sbjct 220 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAA 161 Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTT 127043 |||| ||||| || |||||||| || || |||||||| || ||| ||| | | | Sbjct 160 TCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTAT 101 Query 127044 CGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 127103 ||| ||||| | ||||| || | || | ||||| ||||| || || || || | Sbjct 100 CGATCGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGACGA 41 Query 127104 AAATCTGCAT 127113 |||||||||| Sbjct 40 AAATCTGCAT 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475457654246160