Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2330 120 7e-22 seq3420 109 1e-18 >seq2330 Length=206 Score = 120 bits (132), Expect = 7e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || || || |||| |||||| || || | ||| | ||| ||||| || || || || Sbjct 10 GTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTACGTCCGTCTTCTAGTTGTTTACCA 69 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| ||||| ||||| || ||| |||||||||| || |||||||| ||| Sbjct 70 GCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCCTTT 129 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 || |||| ||||| | | || || ||||| ||||| ||||| || || || ||| Sbjct 130 ACATTATCGATCGTGTCGGAAGACTCAACTTCCAAAGTGATGGTCTTTCCAGTAAGCGTT 189 Query 199613 TTCACAAAAATTTG 199626 ||||||||||| || Sbjct 190 TTCACAAAAATCTG 203 >seq3420 Length=11708 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || || || || || || || | |||||| || || | || Sbjct 289 CGAAGACGAAGCACCAGATGAAGCGTAGATTCTTTCTGAATGTTGTAATCCGCAAGCGTG 230 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || |||||||| || || || |||||||| ||||| ||||| || ||| ||||||| Sbjct 229 CGACCGTCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCT 170 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| || |||| ||||||| | || || |||||| Sbjct 169 TCCTTGTCTTGAATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAACTTCCAAC 110 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || ||||||||||| Sbjct 109 GTAATAGTTTTCCCAGTTAGCGTCTTAACAAAAATTTG 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178811953291353