Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq534 161 1e-34 >seq534 Length=9540 Score = 161 bits (178), Expect = 1e-34 Identities = 635/984 (65%), Gaps = 45/984 (5%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 |||||| | ||| | ||||| || || |||| || || || || | || | || Sbjct 5695 CCCACAACATATGATAATGCGAGTGGCTGTCGGCATACACAAAGAGAATTTGGACGCCGT 5636 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 |||||| || || || | ||||| | | || | || ||||| || || || || Sbjct 5635 TTTGGAAACGTATGAACACATGTCACAAAAGTTCTTTACGCATGCAACTCCGACGCTTTT 5576 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTAT-TGCAAACAAGGAGG 111789 ||| || || || || |||||||| | || ||||| || | | || |||| | | Sbjct 5575 CAATGCGGGAACGCCTCGACCCCAATTATCGTCGTGTTTTCTATTATCCATGCAAG-ATG 5517 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 |||| ||| | |||||||||| ||| || | ||||||| || ||||||||||||| Sbjct 5516 ATTCTATCGACGGCATTTACGACACGCTGAAACAATGTGCGTGTATTTCAAAGTGGGCTG 5457 Query 111850 GTGGTATCGGGAT--GCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTAC 111907 | ||||| || | | | |||| || | | ||| ||| | |||| | || || Sbjct 5456 GCGGTATTGGCGTCAGTATTTCCA--ATATTCGCTCCACCAACAGTTATATTCGCGGGAC 5399 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 ||||| || |||| ||| ||||||||||||| || || || | |||||| || || Sbjct 5398 GAATGGAAGTTCGAATGGAATTGTTCCAATGCTTCGGGTGTTCAATGACACAGCTCGATA 5339 Query 111968 TGTAAACCAA---GCTGGGCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 || | ||| | |||| || || || ||| | ||| | ||||| ||||| ||||| Sbjct 5338 CGTTGATCAAGGCGGTGGGAAGCGGAAAGGGTCTTTTGCAATTTATCTAGAGCCCTGGCA 5279 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 |||||||||| | ||||| || || | ||| || || || |||| || Sbjct 5278 CGCGGATATCTTTGAGTTTCTGGAACTACGTAAGAATCATGGAAATGAACTCCATCGAGC 5219 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 || ||| | || | ||||| ||||| || ||||| || ||||| | || || || | Sbjct 5218 TCGAGATTTGTTTTATGCTCTTTGGATCCCCGATCTGTTTATGAAACGTGTGGAAGACAA 5159 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 | ||| | | || ||||| || |||| || | || | || | | |||| | Sbjct 5158 CCAAGAATGGAGTTTATTCTGTCCGAACGAGGCTCCACGACTTTATGA-GACATGGGGAA 5100 Query 112205 G-GAGTTTGAAGCCCTCTACACAAAGTACGAG---GAAGAAAGT---CGGGCGACTGCGA 112257 | || ||||| || | || | |||||||||| || | | | || ||||| | Sbjct 5099 GCGAATTTGATGCGTTATATAAAAAGTACGAGTCTCAAAACATTGCCCGAAAGACTGTCA 5040 Query 112258 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 | ||||| | ||||| || ||| | | ||| | ||||| || || | Sbjct 5039 AAG-CCCAGC-----AATTGTGGTTTGCCATTTTGGATAGTCAGATTGAGACCGGAACGC 4986 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAAT-TTGG----G 112372 | |||||||||||||||||||| ||||| | || ||||| ||||| |||| Sbjct 4985 CGTATATGCTTTACAAAGACGCTTGTAATCGTAAATCCAATCAGCAGAATCTTGGAACCA 4926 Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGA---CAAAGATGA 112429 | ||||||| ||| ||||| |||||| | || | |||| |||||| | Sbjct 4925 TTCGATCAAG-----CAATCTCTGCTGTGAAATCATCGAGTACTCAGACTCCAAAGAAG- 4872 Query 112430 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAA 112489 ||| || || || | || || ||||| | | || | |||| ||| | ||| Sbjct 4871 --TGGCAGTATGCAATTTGGCTTCCATCGCATTGTCAAAATTTGTGTATC-----AGAAA 4819 Query 112490 GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAG 112549 || |||| | | || |||| | ||||| | || |||| || || ||||| || |||| Sbjct 4818 GA-ATTTCAATTTGCAAAATTATACGAAATCACAAAAATCGTTACGAAAAATCTCAACAA 4760 Query 112550 AGTTATTGATAGAAATTTTTACCC 112573 | | |||||| |||| ||| || Sbjct 4759 AATCATTGATCTCAATTATTATCC 4736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620686075386480