Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3420 82.4 5e-11 >seq3420 Length=11708 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||||||||| || |||| ||| | || | || ||||| ||||| || || || Sbjct 260 TTCTTTCTGAATGTTGTAATCCGCAAGCGTGCGACCGTCTTCCAGTTGTTTACCAGCGAA 201 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || |||||||| || | || | || |||||||| |||||| || || | Sbjct 200 GATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTGGCCTTTAC--A 143 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | ||||||| || | |||||| || | || || ||||| || || || |||| Sbjct 142 T--TATCGATCGTGTCTGAAGACTCAACTTCCAACGTAATAGTTTTCCCAGTTAGCGTCT 85 Query 34966 TCACAAAGATCTGCAT 34981 | ||||| || ||||| Sbjct 84 TAACAAAAATTTGCAT 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324604879969752