Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1573 257 2e-63 >seq1573 Length=148509 Score = 257 bits (284), Expect = 2e-63 Identities = 594/881 (67%), Gaps = 22/881 (2%) Strand=Plus/Minus Query 36890 ATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCAT 36949 |||||||||||| ||| | || ||||| ||||| ||||||| || || || | ||||| Sbjct 118823 ATATTCTCCAACGCGTTTCTCAAAAAAGTTTGTTTTTCCTTGCAGAGAAATCATATCCAT 118764 Query 36950 AAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAGA-AGCC 37008 | ||||| |||||||| | | ||||| | || | | || | | | | | | Sbjct 118763 CCAGTCAAAGGGATTAGAAGCGTGATATAACTTGCTG-ACGCCAAGTGCATGTAACAATC 118705 Query 37009 TATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTA 37068 |||||| ||||| || ||||||| || ||| | | || || |||||||| | | Sbjct 118704 GATCCGCCACAAACTCGATGTATTGACCCATCAAACTTGAATTCATTCCAATTAGCTCGA 118645 Query 37069 CTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA 37128 |||||| || |||| | | |||| || ||| || || || || || || || | Sbjct 118644 CTGGAAGTGAATCTCGTACAAATTCTTGTTCGATGATAACGGCGTCGGAAATGATTGCAT 118585 Query 37129 CAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAA--ACAATAAACATGCAAAATC 37186 |||| |||| | | | ||||| | || | ||| | ||||||||| || Sbjct 118584 GAATAGAGCCTTCTG--GAAGCTTATTTACCAGTTTCGAGTACATCAGACATGCAAAGTC 118527 Query 37187 ACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAA 37246 |||||||| |||||||| | ||| || | ||||| |||||| | ||| ||||| || Sbjct 118526 ACAATGTAGTCCTTCATCACGACTGATGAGCTCATTTGAAAAGCAAAGTCCAGGCATCAA 118467 Query 37247 ACCTCtttttttAATCCAAAATATTGCTGCAAAA-GATCCAGAAAAGAAAATACCTTCAA 37305 |||| ||| || | ||||||||| | ||| || ||||| || || || || ||||| | Sbjct 118466 TCCTCGTTTCTTCAGCCAAAATATAGA-GCAGAATGATCCGGAGAAAAAGATTCCTTCGA 118408 Query 37306 CTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA--CTATA-ATCAGAAATCCAtt 37362 | || ||||| ||||| | | | | || | | | || | ||| | ||||| Sbjct 118407 CGGCCGCAAAGGCTACCACTCTTTCTGCAAACGAGGCATACTTTGGATCGCA---CCATT 118351 Query 37363 tttttGTCCAATCTGCCTTTAATT-TAACACATTCAATTGTTTCAATTGCTTTTAAGAGA 37421 | | ||| | ||| |||| | |||| || ||||||||||| || | || Sbjct 118350 TCAACGCCCATTGTGC-TTTATTGGTAACGCACGGGATTGTTTCAATCGCGC---ACAGT 118295 Query 37422 AAGtttttttCTTCACT---ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCA 37478 || | | || |||| | |||| | || || |||||||| | ||| ||||| ||| Sbjct 118294 AAATGCTGTTTTTCAGTTGGATCTTTGATGTATGTATCAATCAATAACGAATACACTTCC 118235 Query 37479 GAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGA 37538 ||||| |||||||| || || || ||||| || ||||| || | |||||| | | ||| Sbjct 118234 GAGTGTATATTTTCTATTGCAATTTGAAATCCGTAAAAGCATCGAGCTTCGGGGATCTGA 118175 Query 37539 ACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAG 37598 || || | || || | || | |||||||| || || |||||||| ||||||||| Sbjct 118174 ACCTCACTGCTGAAATTCATGGCGAGATTTTCATTGACAATTCCATCACTGGCTGCAAAG 118115 Query 37599 AAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTA 37658 || || | || | ||| ||||| |||||||||| | |||| || ||| ||||| Sbjct 118114 AAGGCCAACACGTGTTTGATAAAGTGTCTTTCATTGTCCGATATATTAAGCCAGTCATTC 118055 Query 37659 ATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATAC 37718 || || | ||||| | ||| || |||||||||| |||||| ||| |||||| Sbjct 118054 ATGTCATGCACCAAATCGATTTCTTCTGCGGTCCAAAAGCTTGCCTCTGCTTTCTTATAC 117995 Query 37719 ATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759 || |||||| ||| |||||||| ||||||| ||||| Sbjct 117994 ATGTCCCAAATCTCAGATTGTTGTATCGGAAATAAGACAAA 117954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592263054654360