Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1573 104 4e-17 >seq1573 Length=148509 Score = 104 bits (114), Expect = 4e-17 Identities = 377/580 (65%), Gaps = 20/580 (3%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACT---GGACCGCCGAAGAGATT 25530 || || ||||| ||||| ||||| || | | ||| || ||||||| ||||| || Sbjct 117981 GAGATTTGGGACATGTATAAGAAAGC---AGAGGCAAGCTTTTGGACCGCAGAAGAAATC 118037 Query 25531 GATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTC 25590 ||| ||| | |||||| | | |||| | |||| | | || || ||| || Sbjct 118038 GATTTGGTGCATGACATGAATGACTGGCTTAATATATCGGACAATGAAAGACACTTTATC 118097 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 || |||||||||| |||||||||||| |||||| || || || || ||||| | | Sbjct 118098 AAACACGTGTTGGCCTTCTTTGCAGCCAGTGATGGAATTGTCAATGAAAATCTCGCCATG 118157 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | |||| ||| || || ||| | || || || || ||||| || || || || Sbjct 118158 AATTTCAGCAGTGAGGTTCAGATCCCCGAAGCTCGATGCTTTTACGGATTTCAAATTGCA 118217 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGAC 25767 || |||||| | ||||| || |||||| | | | |||| || ||||| | ||| Sbjct 118218 ATAGAAAATATACACTCGGAAGTGTATTC---GTTATTGATTGATACATACATCAAAGAT 118274 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 | || | | | | | | | || || || || || || | | | || Sbjct 118275 CCAACTGAAAAACAGCATTTACTGTGCGCGATTGAAACAATCCCGTGCGTTACCAATAAA 118334 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG--CGCTACGTTTGGCGAGCGGCTGG 25885 || | ||||| |||| ||| | | ||| || || |||||| || | ||| Sbjct 118335 GCACAATGGGCGTTGAAATGGTGC--GATCCAAAGTATGCCTCGTTTGCAGAAAGAGTGG 118392 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGG 25944 |||||||||| || || || || ||||||||| ||| || || ||| | || || ||| Sbjct 118393 TAGCCTTTGCGGCCGTCGAAGGAATCTTTTTCTCCGGATCATTCTGC-TCTATATTTTGG 118451 Query 25945 CTCAAGCAGAAGGGGA-CCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 || ||| | | | ||| ||||| || || | |||||| || ||||||||||| | || Sbjct 118452 CTGAAG-AAACGAGGATTGATGCCTGGACTTTGCTTTTCAAATGAGCTCATCAGTCGTGA 118510 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACG 26043 || || || || | || ||||| || ||| | ||| || Sbjct 118511 TGAAGGACTACATTGTGACTTTGCATGTCTGATGTACTCG 118550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928760518944960