Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq3420 82.4 6e-11 >seq3420 Length=11708 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| || || |||| || ||||| ||||| ||| || |||| Sbjct 68 AATGCAAATTTTTGTTAAGACGCTAACTGGGAAAACTATTACGTTGGAAGTTGAGTCTTC 127 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| ||| | | || | ||| || || ||||| || ||| | || ||||| Sbjct 128 AGACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGATCA 187 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || | || ||||| || || |||||| ||||||| | || | || ||||| || Sbjct 188 GCAACGTCTGATCTTCGCTGGTAAACAACTGGAAGACGGTCGCACGCTTGCGGATTACAA 247 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGT 28762 |||||| ||||||||||| || || |||| Sbjct 248 CATTCAGAAAGAATCTACGCTTCATCTGGT 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425367164836161