Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq2614 154 2e-32 >seq2614 Length=9630 Score = 154 bits (170), Expect = 2e-32 Identities = 295/432 (68%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 47757 CTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTTC 47816 ||| ||||||| |||||| |||| | |||||| || | |||||||| | ||| || Sbjct 7931 CTCCACAAACTCACGGACCGAATGCGCTTCTCCTGTAGCCACGACAAAATCTTGAGGATC 7990 Query 47817 TTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACG 47876 | || || | |||| ||||||| |||||||| ||||| ||||| |||||||| || Sbjct 7991 ATTATGCTGCATCATTCTCCACATACATTCGACATAGTCTCTTGCATGACCCCAGTCTCG 8050 Query 47877 AAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTTAA 47936 ||||| | |||||| ||||| | || ||||| | |||||| ||| || | || Sbjct 8051 TTTAGCATCCAAATTTCCAAGATAGAGGCAATCTTGATACCCTTCATTGAT-GCGTACAA 8109 Query 47937 T-GCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAA 47995 || | |||||||| ||||| || || ||| || || | |||| || ||||||| Sbjct 8110 CCGCGCGGGTAATCTTGCGAGTCACGAATGTTAGCCCCCGGCGTGGACTCTCGTGATTAA 8169 Query 47996 AAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGT 48055 | | || ||| | ||| | ||| |||| ||| | || || || ||| | Sbjct 8170 ATAAGATTCCATTCACTGCAAATATTTTATATGCTTCTCTGTAATTAACGACCGACCAAT 8229 Query 48056 ACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCT 48115 | || | | ||||||||||| || ||||| || || || ||| || || | | Sbjct 8230 ATGCAAATTGCTTTGCAACACCGTACGGAGATCGCGGGTAAAAAACCGTCTGTTCATTTT 8289 Query 48116 GTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACCC 48175 |||| || ||| | | || || || || ||||| ||||| |||||||| | || ||| Sbjct 8290 GTGGCGTTTCTCGAGCGTTCCCGTAGAGCTCACTCGTGGAAGCTTGATAAAACCGCACCG 8349 Query 48176 TATCTTCCATCT 48187 | |||||||||| Sbjct 8350 TGTCTTCCATCT 8361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665434014701880