Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq3420 96.9 3e-15 seq2330 89.7 4e-13 >seq3420 Length=11708 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| || || |||| || ||||| ||||| | ||| ||| || Sbjct 68 AATGCAAATTTTTGTTAAGACGCTAACTGGGAAAACTATTACGTTGGAAGTTGAGTCTTC 127 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | ||||| |||||| ||||| ||||| | || ||||| Sbjct 128 AGACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGATCA 187 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | || || | || |||||||| ||||| || | | || | ||||||||||| Sbjct 188 GCAACGTCTGATCTTCGCTGGTAAACAACTGGAAGACGGTCGCACGCTTGCGGATTACAA 247 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTG 110482 |||||| |||||||||||| | || ||||| Sbjct 248 CATTCAGAAAGAATCTACGCTTCATCTGGTG 278 >seq2330 Length=206 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| ||||| | || || || ||||| || | ||| ||| || | Sbjct 206 ATGCAGATTTTTGTGAAAACGCTTACTGGAAAGACCATCACTTTGGAAGTTGAGTCTTCC 147 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | ||||| |||||| ||||||||||| | || ||||| Sbjct 146 GACACGATCGATAATGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 87 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | || |||||||| || || || | | || | |||||||||||| Sbjct 86 CAACGTCTGATCTTCGCTGGTAAACAACTAGAAGACGGACGTACTCTTGCGGATTACAAC 27 Query 110453 ATTCAAAAAGAATCTACGTTGCAC 110476 || || |||||||| ||||||||| Sbjct 26 ATCCAGAAAGAATCAACGTTGCAC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412805076290687