Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq293 378 5e-99 seq2816 360 1e-93 seq6130 210 2e-48 seq5467 111 1e-18 seq1823 109 4e-18 seq39 89.7 4e-12 >seq293 Length=196708 Score = 378 bits (418), Expect = 5e-99 Identities = 1000/1513 (66%), Gaps = 37/1513 (2%) Strand=Plus/Minus Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 || || || ||||| || || ||||| || ||||| || || | ||||| | | Sbjct 109716 TTTGTGATCGTAATCTTATTTTCCTTGTTGGTCGATTTCTCGATCGCGCTTACATTCAAA 109657 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || ||||||||||| | ||| |||||||||||||||||||| || || | | | || Sbjct 109656 ATTCCATTGGCATCGATATCGAATGTGACTTCAATTTGAGGTACACCGCGCGGCATGGGC 109597 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 || || || || | ||| || |||| ||| || || || ||| | || || Sbjct 109596 GGTATTCCGTCAAGATTGAACTTTCCGAGAAGGTTGTTGTCCCGAGTCATGGAGCGCTCT 109537 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 ||||| || | ||| || || | | || || ||| || |||| ||| | | Sbjct 109536 CCCTCAAATACTTGTATGCATACACCTGGCTGGTTTTCTTGGTATGTTGAAAACATTTGA 109477 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 || ||||| ||| | || || || | || | ||||||| | ||||| ||| Sbjct 109476 GACTTTTTCGTAGGTAGCGTGGTATTACGTGGGATCAGTGTGGTCATCACTCCACCCGCT 109417 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 281740 || || | || || || || |||| ||||| | ||| | | || || || ||||| Sbjct 109416 GTCTCAAGTCCCAGCGACAGCGGAGCAACATCCAATAGTAATAGATCCTGCAGCTTTTCG 109357 Query 281741 ------TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCT 281794 |||||| ||| | ||| || ||||| | || |||||| | || || ||| Sbjct 109356 GATTGCTCAGTT---CCACTTAAAATGGCGGCTTGTACAGTTGCACCAAAAGCGACGGCT 109300 Query 281795 TCATCAGGATTAACAG--TTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTT 281852 || || || || | | || || | || ||||| |||||||| | || | || | Sbjct 109299 TCGTCCGGGTTTATCGACTTGCAC--AATTCCTTACCGTTGAAAAACTCAGACAATAGCT 109242 Query 281853 GTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATT 281912 || || ||||||||||||| || || || || | ||||| ||| |||||||| || Sbjct 109241 GTTGCACTTTAGGAATACGAGTCGAGCCACCCACGAGTACAACTTCGTGCACCTGACTTT 109182 Query 281913 TATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGT 281972 | || ||| ||||| || || || || || ||||| | | || | |||| Sbjct 109181 TTGACAATTTAGAATCACGCAACACCTTCTCCACTGGTTCCATT---GTTCGACGGAAGT 109125 Query 281973 ---CTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 282029 ||| ||| | ||||||||| || || || | || ||| |||| | ||| | Sbjct 109124 AATCTGCACATAAATCTTCGAATCGTGCCCTCGTGATTGTAGAATTGAAATCCACTCCCT 109065 Query 282030 CGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCAC 282089 |||||| || |||| |||||| | ||||| || ||||| || | || || || | Sbjct 109064 CGAACAGCGAGTCAATTTCAATGTGTGCTTGAGCGGATGAAGAAAGGGTGCGCTTTGCTC 109005 Query 282090 GTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTAT 282149 | ||||| ||||| | ||| | || | || | ||||| || ||| | ||| Sbjct 109004 GCTCACAAGCTGTGCGTAGACGGCGAAGTGCACGT--TGATTTGTTGTAATATCCTTTCG 108947 Query 282150 AT--TTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCA 282205 || ||||| ||||| || ||||| | ||| | || || ||||||||||||||||| Sbjct 108946 ATGCTTTCTGTTGAATTCGGCAACAAA--ATGATCGACTAGTCGATTATCAAAATCTTCT 108889 Query 282206 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 282265 || ||||| | |||| || | || ||| | || | |||| || ||||| | | Sbjct 108888 CCGCCCAAATGTGTATCACCAGCGGTTGCTTTGACCTCAAAAATGCCTTCTTCGATTGTA 108829 Query 282266 AAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT- 282324 | || | |||||| || || ||||| | |||||| || | | || ||||| || Sbjct 108828 AGTAGTGATACATCAAATGTGCCGCCACCAAGATCAAATATCA--AAAT--ATTTCGTTC 108773 Query 282325 GTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCT 282384 | || || | || | |||||||| | ||| || |||||||| |||||||| || | Sbjct 108772 GCCTCCCTTCCTGTCCAATCCATACGCGATAGCCGCTGCAGTTGGCTCATTAATTATACG 108713 Query 282385 CAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTT 282444 || ||||| | || ||||| ||||| || || || || || | || || || || Sbjct 108712 CAGCACATTTAACCCTGCAATCGCGCCTGCGTCCTTGGTCGCCTGACGCTGCGAGTCATT 108653 Query 282445 AAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGC 282504 ||| |||||||| ||||||||||| || | | | || ||||| || | | |||| || Sbjct 108652 AAAGTATGCAGGTACAGTAATAACCGCGTTTTTGACATCTTTACCGAGAAAAGCTTCGGC 108593 Query 282505 TGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGA 282564 ||| | ||||||| |||||| |||||| || || | ||| || | | || | Sbjct 108592 AATTTCTCTCATTTTGATTAAAACCATTGAAGATATCTCTTCCGGTCGAAAGGATTTTGT 108533 Query 282565 TTCATTTTGATATGATACTTCAAAATATGGT-TTATTACCAACATT---AATAACTTTAA 282620 |||| || ||| || || || || || | || || | | ||||||| | Sbjct 108532 TTCACCTTTGTATTGGAC-GGTAATCATCGTCTTGTCTCCTTCACTAGAAGTAACTTTGA 108474 Query 282621 ATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATC 282680 | ||||||| ||| ||||| | |||||| | ||| || || || |||||| |||| Sbjct 108473 AAGGCCAATGTTTGATATCAGCTTGAACCACAGGATCACTACAACGTCGACCAATCAATC 108414 Query 282681 GTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTC 282740 |||| || || |||| ||| || |||| ||| | || |||| | || ||||| || | Sbjct 108413 GTTTCGCGTCGAAAACAGTGTTTGTTGCATTCATAGCCACTTGGTTCTTCGCTGCGTCAC 108354 Query 282741 CAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGAT 282800 ||||||| || || |||||||| | ||||| || || || || ||||| || |||| Sbjct 108353 CAATCAGTCTCTCCGTATCTGTAAAAGCGACATACGAAGGTGTCGTTCGATTTCCCTGAT 108294 Query 282801 CATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTC 282860 |||||||||| || || ||| | |||||||||| ||||| || || | ||||||| Sbjct 108293 CATTCGCAATGATCTCGACTCGATCATTTTGCCACACACCAACGCATGAGTACGTTGTTC 108234 Query 282861 CTAAATCAATACC 282873 | | |||||| || Sbjct 108233 CAAGATCAATGCC 108221 >seq2816 Length=10603 Score = 360 bits (398), Expect = 1e-93 Identities = 1013/1523 (67%), Gaps = 62/1523 (4%) Strand=Plus/Minus Query 281410 TGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGAC 281469 ||| ||||| ||| | || | || || | ||||||||||| || | || | || Sbjct 1787 TGTCGATTTCTCAACAGCTGAAACGTTTAAGATACCATTGGCGTCAATGTCGTAACATAC 1728 Query 281470 TTCAATTTGAGGGACCCCTCTCTGAG-CA--GGTGGGATCCCTTCCAAATTAAATGTTCC 281526 ||| |||||||| || |||| ||| || || || || || ||||| || ||| |||| Sbjct 1727 TTCGATTTGAGGAACTCCTC---GAGGCATTGGCGGAATACCGTCCAAGTTGAATTTTCC 1671 Query 281527 CAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAG-TA-ACT 281584 ||| || || || ||| | || ||||| || || | |||||| || ||| Sbjct 1670 GAGAAGGTTGTTGTCACGAGTCATCGATCTCTCACCTTCAAAGACTTGGATGCATACACT 1611 Query 281585 ACAGTTTGATTATCT--GAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTT 281641 || | | || ||| |||| || | || | ||| ||||| || ||| || || Sbjct 1610 GCACT--GGTTGTCTTGGAAT--GTGGAGAACAA-CTGAGATTTCTTCGTAGGGATGGTG 1556 Query 281642 GTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGA 281701 |||||||| || | | |||||| | ||| || || || |||||||| || || | Sbjct 1555 GTGTTTCTCGGGATGAGAACGGTCATTACACCTCCGGCAGTCTCTAAACCGAGTGACAAC 1496 Query 281702 GGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC------ATCAGTTTGACCAACA 281755 |||| |||||| | ||| | | || ||| | |||||| |||| | |||| | Sbjct 1495 GGAGCGACATCCAGTAGCAGCAAATCTTGTAATTTTTCGGATTGATCATT---ACCACTA 1439 Query 281756 AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCA 281815 ||||| || ||||| | || ||||| ||||||||||||||||||| || | | || Sbjct 1438 AGAATGGCGGCTTGCACAGTCGCACCGAATGCAACAGCTTCATCAGGGTTGATCGATTTG 1379 Query 281816 TTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGAT 281875 | | ||| ||||| || | ||| | |||||| ||||| || ||||| | Sbjct 1378 CACGGCTCTTTGTTGTTGAAGAAGTCTGATAAGAGTTGTTGCACCTTGGGGATACGGGTA 1319 Query 281876 GATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAA 281935 || || || || | |||| ||| || || || || || ||| ||||| || Sbjct 1318 GAACCACCGACAAGGACAACTTCGTGTACTTGACTCTTCGACAATTTGGAATCACGCAAG 1259 Query 281936 ACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGT---CTGAACAAAGTTCTTCGAAT 281992 |||||||| || || || | | | || |||| | ||||| | |||||||| Sbjct 1258 ACTTTTTCGACAGGGTCCATT---GTTTTACGGAAGTAATCGGAACATAAATCTTCGAAA 1202 Query 281993 TTAGCTCTAGTAAGAG-TGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAAT 282051 ||||| ||| | | ||| | | | |||||||| ||| | || || | |||||| Sbjct 1201 CGAGCTCGAGTGATGGATGAGTTGA-AGTCAATTCCATCGGCGAGCGAGTCGATTTCAAT 1143 Query 282052 CGTA-GTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTC 282110 ||| | |||| || ||||| || | ||| || ||||||||||||| || | ||||| Sbjct 1142 -GTATGCCTGAGCAGACGAAGAAAGCGTACGCTTGGCACGTTCACATGACGTACGTAGTC 1084 Query 282111 TTCGTAAGGCTT-TTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCA 282169 || | || ||| | || | | ||| | | ||| | |||||| || || Sbjct 1083 GACGCAGTGCACGTTGGTTCGTGGTG-ATGTCTTTACGGTGTTTGCGCTTGAATTCAGCA 1025 Query 282170 ACACACCATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTG 282227 ||| | ||| | || ||||| || |||||||||||||| ||||| | || | ||| | Sbjct 1024 ACAAA--ATGGTCTACTAGACGGTTGTCAAAATCTTCACCACCCAAGTGGGTGTCTCCAG 967 Query 282228 ACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTC 282287 || ||| | |||| |||| ||| || |||| | ||| | | ||||| || | Sbjct 966 CTGTGGCTTTAACTTCAAAAATTCCGTCCTCAATGGTCAACAAGGACACATCGAATGTAC 907 Query 282288 CACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCAT 282347 | ||||| | ||| || || || ||||| ||||| ||| | || || | ||| | Sbjct 906 CTCCACCAAGATCGAAGATGAGCACATTGCATTCTTGACCTT---TCTTCTCTAAACCGT 850 Query 282348 ACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTC 282407 |||||| ||||| |||||||||||||| || |||| | || || | ||| || || Sbjct 849 ACGCAATGGCAGCTGCAGTTGGTTCATTGATGATTCGAAGCACGTTCAAACCGGCGATCG 790 Query 282408 TTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAA 282467 || || ||||| || ||||| | ||| |||||||| || ||||| || || || || | Sbjct 789 CACCCGCGTCTTTGGTAGCTTGACGTTGGGAATCGTTGAAGTATGCTGGTACGGTGATGA 730 Query 282468 CGGCATCTGTTACTTCTTTTCCAATATAAGCGCTT--GCTGTTTGTTTCAT-TTTACTTA 282524 |||||| | |||| ||||| || || ||||| | || ||| ||||| | Sbjct 729 CGGCATTCTTCACTTGCTTTCCGATGTA--CGCTTCAGAGACTTCACGCATCTTTACG-A 673 Query 282525 AAATCATTGATGAAATTTGTTCTGGA-GAATA--TTGCTTGGATTCATTTTGATATGATA 282581 | |||||| ||||||| ||| || ||| | || ||| |||| | | | | | Sbjct 672 GCACCATTGAGGAAATTTCTTCAGGTTGAAAAATTTTCTT---TTCACCCTTAAAGGTGA 616 Query 282582 CTTCAAAATATGGTTTATTACCAA---CATTAATAACTTTAAATGGCCAATATTTCATAT 282638 |||| | | || || || ||| | || |||| | |||||||| | ||||| | Sbjct 615 CTTCGATCAAGGGCTTGTTGCCAGGTCCGTTTTGAACTGTGAATGGCCAGTGCTTCATGT 556 Query 282639 CTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAG 282698 | | ||| || || |||| |||| || |||||| || ||||| || || || | | Sbjct 555 CAGCTTGGACGATTGGGTCCGAAAAAGTTCGACCAATCAAACGTTTGGCGTCGAAGACGG 496 Query 282699 TATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCT 282758 | || | || || | || |||| | ||| || ||||| ||||| ||| |||| || | Sbjct 495 TGTTTGCTGCGTTCATGGCTACTTGGTTTTTAGCGGCATCACCAATAAGACGTTCAGTGT 436 Query 282759 CTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAA 282818 | || || | ||| || || ||||| || || || ||||| || || ||||||||||| | Sbjct 435 CGGTGAAAGCAACGTAGGACGGAGTGGTTCGGTTTCCTTGGTCGTTAGCAATAATTTCGA 376 Query 282819 CTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAG 282878 || | |||||||||| ||||| ||||| ||||||| || | |||||||||||| | Sbjct 375 CTCGATCATTTTGCCAGACACCCACACATGAGTAAGTTGTACCAAGATCAATACCAATTG 316 Query 282879 CAATTTTATCTGACATTATTATT 282901 | |||||||| |||| || || Sbjct 315 C---TTTATCTGTCATTGTTTTT 296 >seq6130 Length=8767 Score = 210 bits (232), Expect = 2e-48 Identities = 697/1070 (65%), Gaps = 33/1070 (3%) Strand=Plus/Plus Query 281411 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 281470 || || || ||| | ||||| ||| | ||||||||||| ||||| | ||||| || ||| Sbjct 1819 GTCGACTTCTCAACCGCAGTAACACTGAGAATACCATTCGCATCGACTTCAAAGGTTACT 1878 Query 281471 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 281530 || ||||| || || |||| | || || || || ||||| || ||| | || || Sbjct 1879 TCGATTTGGGGCACACCTCGTGGTATTGGCGGAATTCCCTCCAAGTTGAATTTACCTAGC 1938 Query 281531 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 281590 || || || ||| | | || ||||| ||| | | ||| || ||| || | Sbjct 1939 AAATGGTTGTCGCGAGTCATTGACCGCTCACCTTCGTACACTTGTATCAAGACTCCACTC 1998 Query 281591 TGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCT 281649 |||||||| | ||| || | ||| |||| |||||| || || | || || |||| Sbjct 1999 TGATTATCGGCATACGTCGAAAACG-TCTGCGATTTTCTAGTGGGCACGGTCGTATTTCG 2057 Query 281650 ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 281709 |||| | ||||| | ||||| || || || | || | || | |||| || Sbjct 2058 TGCAATCAAGACAGTCATCACTCCACCGGCAGTCTCGAGCCCCATTGACAATGGAGCAAC 2117 Query 281710 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGA------CCAACA---AGAAT 281760 || | || |||| ||| || || | ||| | |||| ||| || || || Sbjct 2118 GTCTAAAAGCACAACATTCTGTAGCCTCTCA---GATTGATCCGAACCACCACTGAGGAT 2174 Query 281761 AGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAG 281820 ||| || || | | |||||| ||||| || || || || ||||| | | | | || Sbjct 2175 AGCGGCCTGGACCGTAGCACCGTATGCGACTGCCTCGTCGGGATTGATTGACTTGTAGAG 2234 Query 281821 TTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCC 281880 | ||| || |||||||||| || | | |||| ||| || || || || | || || Sbjct 2235 CTCTTTTCCGTTGAAAAAATCGGATAACATTTGTTGTACTTTTGGGATTCGCGTGGAACC 2294 Query 281881 TCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTT 281940 || || || || |||||||||| ||| ||| | ||||||| || | ||||| Sbjct 2295 ACCGACCAACACGATTTCATGCAGCTGATTTTTCGCGAGTTTTGCGTCGCGAAGTACTTT 2354 Query 281941 TTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCT 282000 |||||| || || | || ||| |||| || || ||||| || ||||| Sbjct 2355 TTCAACTGGCTCCATGGTTTTTCGAAAGTAGTCGCTGCACAGATCTTCAAAGCGAGCTCG 2414 Query 282001 AGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA-GTTT 282059 || | || || |||||| ||| || || ||||| | ||||| ||| | || Sbjct 2415 TGTGATTGTACTGTTGAAATCAACTCCCTCATGTAATGAATCGATCTCAAT-GTACGCTT 2473 Query 282060 GAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG 282119 | | || |||| | ||||| || |||||||| || | | |||| |||| | Sbjct 2474 GCGCGCTCGACGATAAAGTTCGTTTTGCGCGTTCACACGCACTTCGAAGTCGCCGTAGTG 2533 Query 282120 CTTTTGCTGATT----GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTC-AACACA 282174 || ||||||| ||| |||||| | |||||||| ||||| || | || | | Sbjct 2534 CTC--GCTGATTTTGTGAT--AAATCTTTCCGATATTTTCGTTTGAACTCGGCCAAGAAA 2589 Query 282175 CCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGC 282234 | | || | ||||| ||||| |||||||| ||||| | || | || | |||||| Sbjct 2590 TGCTCT-ACTAACCGATTGTCAAAGTCTTCACCACCCAAATGTGTGTCACCAGCCGTAGC 2648 Query 282235 TCTTACTTGGAAAAGTCCATCTTCAA--GAGACAAAAGAGTAACATCATGGGTTCCACCA 282292 |||||||| |||| || ||||| | | || || || |||||| ||||||||| Sbjct 2649 TCTTACTTCAAAAACCCCTTCTTCGATCGTGAGCAACGAC--ACATCAAACGTTCCACCA 2706 Query 282293 CCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCA 282352 || | || ||||| || || || |||| | | | || ||||| || || || Sbjct 2707 CCAAGGTCGAAAATTAGCACGTTGTGTTCTCCACCCT---TCTTGTCAAGTCCGTATGCT 2763 Query 282353 AAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCT 282412 | ||| || || || || || || | ||||| | ||||| | ||||||||| |||| Sbjct 2764 ATAGCTGCTGCGGTAGGCTCGTTGAGAATTCGGAGTACATTTATTCCAGCAATTACTCCT 2823 Query 282413 GCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 |||||||| || ||||| | || ||||||||||| || || || || || Sbjct 2824 GCATCTTTCGTTGCTTGCCGCTGAGAATCGTTAAAGTACGCCGGGACGGT 2873 >seq5467 Length=9666 Score = 111 bits (122), Expect = 1e-18 Identities = 315/475 (66%), Gaps = 27/475 (6%) Strand=Plus/Plus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 ||||| | |||||||| ||||| | ||| || | |||||||||||||| || || | | Sbjct 6563 ACATTCACGATACCATTCGCATCGATATCGAACGACACTTCAATTTGAGGTACACCACGC 6622 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 | |||||||| || ||| |||||| ||| |||| || || |||||| || | | Sbjct 6623 GGTGCAGGTGGAATTCCTACCAAATCAAAGTTTCCGAGCGATTTGTTATCTGCAGCCATT 6682 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 | |||||| |||| || | || |||| |||| ||| || ||| | || | Sbjct 6683 TCTCGTTCGCCCTGTAACACTTTGATACCAACTTGAGTCTGTGAATCCGCGGCCGTAGAG 6742 Query 281612 AATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTC----TATCAATAATATTGGTCA 281666 ||||| ||| || ||||| |||||| |||||||||| ||||| | || || | Sbjct 6743 AATAC-CTGCGACTTTTTTGTAGGAATGGTTGTGTTTCGCGGTATCAGT----TTAGTGA 6797 Query 281667 TAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT 281726 | ||| || ||||| | || || || | ||||| ||||||| | |||| || Sbjct 6798 ACACACCGCCTAACGTTTCAATTCCGAGCGACAATGGAGTCACATCAAGCA--ACAAAAT 6855 Query 281727 TTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAG-CACCATAT 281785 | ||||| || | |||| | | | | | |||||||||| | ||||| Sbjct 6856 ------ATCTTTCA-CA---TCACCACGTAACACACCGCCCTGAATAGCAGCCCCCATA- 6904 Query 281786 GCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAA 281845 || || ||||||| ||||||||| || ||||||||||| ||||| | | Sbjct 6905 GCCACGACTTCATCGGGATTAACACCTTTGGAAGGTTTTTTACCA---AAAAAGTCTTCC 6961 Query 281846 AGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 281900 | |||| ||| ||||| || ||||| ||| || ||||||| | ||||| Sbjct 6962 ACTGCTTGTTGTACTTTAGGCATTCGAGACATTCCACCCACTAATATCACTTCAT 7016 >seq1823 Length=53609 Score = 109 bits (120), Expect = 4e-18 Identities = 379/583 (65%), Gaps = 20/583 (3%) Strand=Plus/Plus Query 400252 AAATTATATAATGCTCACAAAGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTG 400311 ||||| || |||| | | || ||||| || ||| | || ||||| | ||| | Sbjct 34616 AAATTGGATGATGCGAATTACGCTGGAACAGCCGAGGGAAAGAATTGTACTTTGATTCTA 34675 Query 400312 ACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATGTTATTGGAAGAGAT 400371 ||||| ||||| || || |||| | | || || ||| || | ||||||||| Sbjct 34676 ACAGAAGGAGACTCCGCAAAAAGTCTGACGATTGGGGGACTTTCAGTAGTAGGAAGAGAT 34735 Query 400372 TATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaa 400431 || || || || ||||| || | |||||| || |||| ||| | || || || | | Sbjct 34736 TACTACGGTGTGTTCCCGCTGAAAGGAAAGCTCCTGAACGTTCGTGAGGCAAGCCATTCT 34795 Query 400432 aaaaTTGCCGATAATGAGGAAATTACAGCA-ATCaaaaaaaTTGTTGGACTTGAACAAGG 400490 ||||| | | ||||| || || ||| | ||| ||| ||| |||| || || | || Sbjct 34796 CAAATTCTCAAAAATGAAGAGAT-ACAAAATATCGTAAAGATTCTTGGGCTCAAATACGG 34854 Query 400491 AAAAGTTTATGA-TGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATC 400549 ||||||| | | | | || | | ||| ||||| | | |||||| | ||||||| Sbjct 34855 TCAAGTTTACCAGTCAACAAAATCGCT-ACGCTATGGGCATTTGATGATTATGGCTGATC 34913 Query 400550 AAGATGTTGATGGGTACCATATCAAAGGATTAATCATGAATTTTATCCATTGTTTTTGGC 400609 ||||| ||||| || || ||||| | | || ||||| |||||| ||| |||| Sbjct 34914 AAGATCACGATGGAAGTCACATTAAAGGTCTTGTGATCAATTTCATCCATCATTTCTGGC 34973 Query 400610 CATCTCTTGTTAAATACGAAGGGTTTATTCAATCATTTGCAACTCCACTATTAAAAGCCA 400669 |||| | || || |||||| ||||| || |||| |||||| | | ||| | Sbjct 34974 CATCATTACTTCAAATCGAAGGTTTTATGCACGAATTTATCACTCCAATTGTCAAATGCG 35033 Query 400670 CCAAAGGAA-AAGGTAAAACAAAACAAGTTGTTGCATTTACA-AGTCCCCAATCTTTTGA 400727 | ||||||| || | || ||| ||| |||||| | | || | | ||| Sbjct 35034 CAAAAGGAAGAATG--------AAGAAGGTGT----TTTACACAATGCC--AGAGTATGA 35079 Query 400728 GGAATGGAAAAAGGAAAACAATGACGGAAAAGGATGGTCAATCAAATATTACAAAGGATT 400787 | ||||| || | |||| |||| |||||||| ||||| ||||||||||| | Sbjct 35080 AGCATGGAGGCTGGTCACCAATAACGGTCAAGGATGGAGGATCAAGTATTACAAAGGTCT 35139 Query 400788 AGGTACCAGTGACCCAGCAGAAGCTCAAGAATGTTTTGCAGAT 400830 || || || ||| ||||| |||||| |||| | ||| Sbjct 35140 CGGGACAAGCACAACAGAGGAAGCGAAAGAATATTTTTCCGAT 35182 >seq39 Length=11436 Score = 89.7 bits (98), Expect = 4e-12 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 432285 AGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCA 432344 ||||| |||||||| ||||| ||||| |||||||||||||| |||||||| | || || Sbjct 7485 AGAGGAAAAGAAGGACGTATCAGAGGCAATTTGATGGGAAAACGTGTCGACTTTTCAGCT 7544 Query 432345 CGTACAGTTATTACTTCTGATCCTAAT 432371 || || ||||||||| | ||||| ||| Sbjct 7545 CGAACTGTTATTACTGCCGATCCAAAT 7571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740274013776534